Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1940
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Entry
NCDO2118_1940 CDS
T03437
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCDO2118_1940 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_1940 (uvrA)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCDO2118_1940 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCDO2118_1940 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
AAA_21
AAA_33
Viral_helicase1
AAA_22
DnaJ_CXXCXGXG
NACHT
AAA_14
SLFN-g3_helicase
nSTAND3
cobW
NB-ARC
Septin
MMR_HSR1
DUF87
BCA_ABC_TP_C
IIGP
Frankia_peptide
Dynamin_N
DUF463
Motif
Other DBs
NCBI-ProteinID:
AII13395
UniProt:
A0ABC8A832
LinkDB
All DBs
Position
complement(2083075..2085897)
Genome browser
AA seq
940 aa
AA seq
DB search
MPQDKIVIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLS
AYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTP
YCVNGHGKISAQSVEEIVEQILELPEKTRLQILAPVVRTKKGTHVKMFERIQKDGYVRVR
VDGEVYDISEVPELDKNKKHNIEIVIDRIVVKEGIRSRLFDSVEAALHQTEGYVIVDKMD
GSELLFSEFYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEPDVDLLIPDTSKT
LREGAIIYWYGKASTYYPALLEQAMEQFGIDLDRPWEKLSEKEQQIVLYGNGDKLFHFLH
EGDFGLRDQDMTFVGVIPNLWRRYRSGMSESAREMARSYMTELTCTTCHGYRLNDQALSV
KVGEKNIAEFSILSIGDTLDYVKSLVLSANNEIIAKPILKEIKDRLTFLKNVGLDYLTLS
RSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTL
IVVEHDEDTMMAADWLIDVGPGAGDLGGEIIASGTPKQVMKNKKSLTGQYLSGKRAIPVP
EKRRAIDKKKMVKITGASENNLQNLDVEFPMGVMTAVTGVSGSGKSTLVNSILKKSLAQK
LNHNSEKPGKHKKITGYEGIERLIDIDQSPIGRTPRSNPATYTSVFDDIRDLFANTNEAK
IRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKG
KNISEVLDMRVSDGLEFFRHIPKIERKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLAS
ELQKRSNGKAFYILDEPTTGLHSEDIATLIQVLDRLVEQGNTIVVIEHNLDVIKTADYII
DLGPEGGAGGGTILAKGRPEEVAKVADSYTGQYLKAKLEK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagataaaatagtaatacatggtgcacgtgagcacaatttaaaaaatatagat
gttgaaattccaagagataaattagttgttgttactggggtttcagggtctgggaaatca
tctctggcctttgaaactttatatgcagaaggtcaacgtcgatatgttgaatctttgtca
gcttatgccagacagtttttaggaaatatggataaaccagatgttgattcaattgatggt
ttgtcgccagcaatctctattgaccaaaaaacaacttctaaaaatcctcgctcaacagtc
gggacggttacggaaattaatgactatttgcgtctattatacgcccgtgttgggacgcca
tattgtgtgaatggtcatggaaaaatttcggcacagtcagttgaagaaattgttgaacaa
attcttgaactccctgaaaaaacacgtttacaaattctcgctcctgtcgtacgtaccaaa
aaagggactcatgttaaaatgtttgagcgtatccaaaaagatggttatgttcgtgttcgt
gttgatggcgaagtttatgatatttcagaagttccagaacttgataaaaataaaaagcac
aacattgaaattgtcattgaccggattgttgtaaaagaaggaattcgttcgcgtcttttt
gactctgtagaggctgcgcttcatcagactgagggttatgttattgttgataaaatggat
ggttcagagcttttatttagtgaattttatgcctgtccagtttgtggatttactgttcca
gaacttgaaccacgcctcttctcattcaatgctccttttggctcatgcccagattgtgat
ggtttaggagttaaattggaacccgatgtcgatttattgattcctgatacaagcaaaaca
ctgcgtgagggagcaattatctattggtatgggaaagcctcaacttattaccctgctctt
ttagagcaagcaatggagcaattcggcattgatttagataggccttgggaaaaactgtca
gaaaaagaacaacaaattgttttatatggaaatggagataaacttttccattttctgcac
gaaggagattttggattacgtgaccaagatatgacctttgttggggtcattcctaatctt
tggcgtcgttatcgttcaggaatgagcgagtcagctagagaaatggcgcgttcttacatg
actgaattgacttgtacgacttgtcatggttatcgtttaaatgatcaagcactttctgtt
aaagtgggagagaaaaatattgctgaattttcaattctgtcaattggcgatacgcttgat
tatgtgaaaagtttagttctttctgcaaataatgaaattatcgcaaaacctattttgaaa
gaaattaaagaccgtttgactttcttgaaaaatgttggtttggattatcttacgctatct
cgttcaagcggaacactttctggtggagagtcacaacgcattcgtttagcgacacaaatt
ggttcaaatttatcaggcgttttgtatattctggatgaaccttccattggtttacatcaa
agagataatgacagattgattgagtctttacaaaagatgcgtgatttggggaatacctta
attgtcgttgaacatgatgaggacacgatgatggcagccgattggctcattgatgttggc
cctggggcaggtgatttaggaggtgaaattattgcctctggaacaccaaaacaagtcatg
aaaaataaaaaatcactgacagggcaatatttgtcaggaaaaagagccattccagttccc
gaaaaacgtcgagccattgataagaaaaaaatggtcaagattacaggtgcaagtgagaac
aacttgcaaaaccttgacgttgagtttccaatgggagttatgacggctgtaactggggtt
tctggttctggtaaatcaactttagttaacagtattttaaagaaatcattagctcaaaaa
ttgaatcacaactcagagaaacctggtaagcataaaaaaattactggttatgaaggaatt
gagcgtttgattgatattgaccaaagtccaattggtcgaactccacgttcaaatccggct
acttataccagcgtctttgatgacattcgtgatttatttgccaatacaaatgaagcaaaa
attcgtggttataaaaaaggacgtttctcatttaatgttaaaggtggacgttgtgaagcc
tgttctggtgatggaatcatcaaaattgaaatgcatttcttgccggatgtttatgttcca
tgtgaagtttgccatggcagacgctacaattcagaaactttagaagttcattataaaggg
aagaatatttcggaagtactcgatatgcgcgtgtctgatggattggaattcttccgtcat
attccaaaaattgaacgtaaactccaaacgattgttgatgtaggtttgggatatgtgaca
cttggacaaccggcaactactttatcaggtggggaagctcaacggatgaaattagcttct
gaattgcaaaaacgttcaaatggtaaagctttttatatcttggatgaaccaacaactggt
ttgcacagtgaagatattgcgactctgattcaagtattagatcgtttggttgaacaagga
aatacgattgttgtcattgagcataatttggatgtcattaaaacagcagattacatcatc
gacttaggtccagaaggtggtgctggtggtggaacaattcttgccaaaggaagaccagaa
gaggtagcaaaagttgctgacagctatactggtcagtatttgaaagcgaaattggaaaaa
tag
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