Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1975
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Entry
NCDO2118_1975 CDS
T03437
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCDO2118_1975 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llx03019
]
NCDO2118_1975 (pnp)
03016 Transfer RNA biogenesis [BR:
llx03016
]
NCDO2118_1975 (pnp)
Enzymes [BR:
llx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCDO2118_1975 (pnp)
Messenger RNA biogenesis [BR:
llx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCDO2118_1975 (pnp)
Transfer RNA biogenesis [BR:
llx03016
]
Prokaryotic type
tRNA degradation factors
NCDO2118_1975 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
PCB_OB
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AII13430
UniProt:
A0ABC8A7T4
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All DBs
Position
complement(2118733..2121054)
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AA seq
773 aa
AA seq
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MAKETFSIEFAGRTLTVETGQVAKQANGAVVVRYGDTTVLTAATMGKMATGDFFPLQVNY
EEKMYAAGKFPGGFNKREARPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDEN
ASGRVAAMFGSSLALAISDIPFDGPIAGVEVAYIDGEYIINPTVAEKEASSLELSVAGNI
NAINMVESGAKELSEEVMLGALLAGHNAVKELIEFQNEIVAKVGKEKAEVELLHVDEDLK
AEVIAAYNSDLQKAVQIEEKLARESATKAVKEAIISVYSAKYENDENLSIILRDLAEILE
GMEHAEVRRLITEDKIRPDGRKIDEIRPLDAEIDFTPRNITHGTGLFTRGQTQALSTLTL
APMNEAQIIDGLNDEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALEQVLP
SLEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYT
VLTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKISGITPEILAEALAQAKTARFQILDV
IEATIAQPREELAPSAPKIDTITIPVDKIKVVIGKGGEQIDKIIAETGVKIDIDDEGLCS
IFSSDQAAIDRAKEIIAELVREAKVGEIYDAKVVRIESFGAFVNLFGKQDAMVHISEMAW
SRTENVEDVVKLGDTVKVKIMKIDDKGRVDASMRALVEKPEGYVEPERKPRERRENGDRR
KGNGNSNRGNGLDRRNNDRNNQGNKVGNHSFELRERKSHIDEEFPELSTKKPE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagaaacattttcaatcgaatttgcaggtcggacattaactgttgaaacaggt
caagttgcaaaacaagcaaatggtgctgttgttgtacgttatggagatacaactgtttta
acagccgctacaatgggtaaaatggctacgggtgatttcttcccacttcaagtgaactat
gaagaaaaaatgtatgctgctggtaaattcccaggaggtttcaacaaacgtgaggctcgt
ccgtcgactgatgcgacattgactgctcgtttaattgaccgcccaattcgtcctatgttt
gctgaaggttttcgtaatgaagttcaggtcattaatactgttctttcttatgatgaaaat
gcttctggtcgtgtggcagcaatgtttggctcttctttagcgcttgcaatttctgatatt
ccatttgatggaccaattgcaggtgttgaagttgcttatattgatggagaatatatcatc
aatccaactgttgcggaaaaagaggcatcaagtttggagctctctgttgcgggaaatatc
aacgcaatcaatatggttgaatctggggccaaggaactttcagaagaagtgatgcttggt
gcacttttggcaggacataatgctgttaaagaattaattgaatttcaaaatgaaattgtt
gcaaaagttggaaaagaaaaagctgaagttgaacttttgcatgttgatgaagatttaaaa
gccgaagtgattgcagcttacaattcagatttgcaaaaagcagttcaaattgaagaaaaa
ttggcgcgtgaatctgcgacaaaagcagttaaagaggcgataatttctgtttacagtgca
aaatatgagaacgatgaaaatctatcaatcattttgcgtgatcttgctgaaattcttgaa
ggaatggaacatgcggaagttcgtcgcttgattactgaagataaaatccgtcctgatgga
cgtaagattgatgaaattcgcccgcttgatgctgaaattgactttaccccacgtaatatt
acacatgggacaggtttatttactcgtggtcaaacccaagctctatcaacattgactttg
gcaccaatgaatgaagcacaaatcattgatggtttgaatgatgaatataaaaaacgtttt
atgcatcattataatttcccacagtattctgttggggaaacaggacgttacggggcacct
ggacgtcgtgaaattggtcacggagcgctcggtgaacgtgctttagaacaagtattgcct
tctttagaggaattcccttatgccattcgtttggtcgctgaagttttagaatcaaatggt
tcgtcatcacaagcttcaatctgtgcaggaacacttgcactgatggccggtggtgtacca
atcaaagcaccagttgctgggattgcgatgggcttgatttctgacggaacaaattatact
gttttgacagatattcaagggcttgaagaccattttggtgatatggacttcaaggttgcg
ggaactcgtgacgggattactgcactacaaatggatattaaaatttcaggaattacacca
gaaattcttgccgaagctcttgcacaagcaaaaactgcacgtttccaaattcttgatgta
attgaagcaacaattgcacaacctcgtgaagagttagcaccttcagcacctaaaattgat
acaattacaattcctgtcgataagattaaagttgtcatcggtaaaggcggcgagcaaatc
gataaaattattgctgaaacgggcgtaaaaattgatattgatgacgaaggactttgttca
attttctcttctgaccaagcagcgattgatcgtgctaaagaaattattgctgaacttgtt
cgtgaagcaaaagttggtgaaatttacgatgcaaaagtggttcgtatcgaaagttttggt
gcttttgtaaatctatttggtaagcaagatgcaatggtgcatatttctgaaatggcttgg
tctcggacagaaaatgttgaagatgttgtgaaattaggtgacactgtcaaagttaaaatc
atgaaaattgatgacaagggtcgcgtagatgcatcaatgcgtgctttagttgagaaacca
gaaggttatgttgaacctgagcgtaaaccaagagaacgccgtgaaaatggtgaccgtcgc
aaaggtaacggaaatagtaaccgtggtaatggtcttgaccgtcgtaataatgaccgtaat
aatcagggaaataaagttggaaaccacagttttgagctccgtgaacgtaaatcacatatt
gatgaagagtttccagaactctcaactaaaaaaccagaataa
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