Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_2297
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Entry
NCDO2118_2297 CDS
T03437
Symbol
dnaH
Name
(GenBank) DNA polymerase III subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03030
DNA replication
llx03430
Mismatch repair
llx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCDO2118_2297 (dnaH)
03430 Mismatch repair
NCDO2118_2297 (dnaH)
03440 Homologous recombination
NCDO2118_2297 (dnaH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llx03032
]
NCDO2118_2297 (dnaH)
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_2297 (dnaH)
Enzymes [BR:
llx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCDO2118_2297 (dnaH)
DNA replication proteins [BR:
llx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCDO2118_2297 (dnaH)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCDO2118_2297 (dnaH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_5
RuvB_N
TIP49
AAA_19
AAA_14
DNA_pol3_gamma3
AAA_24
RCF1-5-like_lid
AAA_16
AAA_2
AAA_7
AAA_assoc_2
Glyco_tranf_2_5
PIF1
Mg_chelatase
ATG14
Motif
Other DBs
NCBI-ProteinID:
AII13748
UniProt:
A0ABC8A9J1
LinkDB
All DBs
Position
complement(2458115..2459773)
Genome browser
AA seq
552 aa
AA seq
DB search
MAYQALYRKYRSQRFDEMVGQEVVATTLKNAIVNHQISHAYLFSGPRGTGKTSAAKIFAK
AINCPNQVDGEPCNNCFICDSITKGSLDDVIELDAASNNGVDEIREIRDKSTYAASQATY
KVYIIDEVHMLSTGAFNALLKTLEEPTENVVFVLATTELQKIPATIISRVQRFAFKSITT
GDIRTYLAKIMADEGLEFDGKALDVIAKAAEGGMRDALSLLDQALSFSSGKLEENDALLV
TGSIAADALVTYVAALFEHDEAKALTELDKIFAEGKNMLRFTEDLLAYLRDLLLDKNSQY
DRGQIFSWIDVAIESLKTIKETTQTKIAADVMTMRLAEIGQNNLLTASQGEIPNQLTAEI
ATLKTEINQLKAQISAGQIQVNSDSQNNLLTEKVKASSKPIASKKRQINKDLIYKALAEA
TNEARKAALSAWPELVASVTKPADRALLNNTAPVAASENFLVVTFPHENLAKRVSENEEL
QLFCGNLLSSIVGFAPEIISLAEQDWQEVRAEYVSNLKSENVQEDKEDEKEPDETVNLAK
ELFGEKVVEIND
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcaagcattatatagaaaatatcgaagtcaaagatttgatgaaatggtgggg
caagaagttgtagcaacaacattaaaaaatgcgattgtcaatcatcaaatttcacatgct
tatcttttttctggtccaagagggacagggaaaacctcagcagctaaaatttttgctaag
gcaataaattgtcctaatcaagtggatggagagccctgcaataattgctttatttgcgac
tcaatcaccaaaggaagcttagatgatgtcattgaacttgatgcggcatcaaataatggg
gttgacgaaattcgagaaattcgagataaatcaacttacgcagctagtcaagccacttac
aaggtttatattattgatgaagtgcatatgctttcaacaggggcttttaatgcacttttg
aaaacactagaagaacctacagaaaatgttgttttcgtcctggctactactgaattacaa
aaaattccagcaaccattatctcgcgtgttcaacgttttgcttttaaatcaatcacaaca
ggagatattcggacttatttagcaaaaataatggctgatgaaggacttgaattcgacggt
aaagcactcgatgttattgctaaagcagctgaaggtggaatgcgtgatgccctctcttta
ttagaccaagccttatcgttttcatcaggaaaattagaagaaaatgatgcactacttgtc
acagggtcgattgctgcagatgctttagtaacatatgttgcagcactttttgagcatgat
gaagcaaaagcgctgacggaacttgataagatttttgctgaaggaaaaaatatgcttcga
tttacggaagatttattagcataccttcgggatttactcttggataaaaattctcagtat
gaccggggtcaaattttttcatggattgatgttgcaattgaaagtttgaaaacgataaag
gaaacgactcaaacaaaaattgcggcagacgtcatgaccatgcgtttggctgaaattgga
caaaataatttactgacagcttcgcaaggagaaatccctaatcagctgacagccgaaatt
gctactttaaaaaccgaaattaatcaattgaaagctcaaatttcagctggtcaaattcag
gtaaattcagattcacaaaataatttactgacagaaaaagttaaagccagttcgaaacca
atagcatctaaaaaacgccaaattaacaaagatttaatttataaagctttggctgaggcg
acaaatgaagctagaaaagctgctctaagtgcgtggccagaacttgttgcttcggtaact
aaaccggcagaccgagctttacttaataatacagcgcctgtcgctgcgtcagaaaatttc
cttgtggtgacttttcctcatgagaatcttgctaaaagagtcagtgaaaatgaagaattg
caacttttttgtgggaatctcttgagttcaattgttggatttgcgccagaaattatttct
cttgctgaacaagactggcaagaagttcgagcggaatatgtttctaatttaaaatctgaa
aatgttcaagaagataaagaagatgaaaaagagccggatgaaacggtaaatttagctaaa
gaactctttggtgaaaaagtagttgaaattaatgattaa
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