Legionella lytica: J2N86_04340
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Entry
J2N86_04340 CDS
T08304
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lly
Legionella lytica
Pathway
lly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J2N86_04340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lly03019
]
J2N86_04340
03009 Ribosome biogenesis [BR:
lly03009
]
J2N86_04340
Enzymes [BR:
lly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J2N86_04340
Messenger RNA biogenesis [BR:
lly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J2N86_04340
Ribosome biogenesis [BR:
lly03009
]
Prokaryotic type
rRNA helicases
J2N86_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
AAA_19
NMT1_2
adh_short
Tox-MPTase3
Motif
Other DBs
NCBI-ProteinID:
USQ14551
UniProt:
A0ABY4YAK2
LinkDB
All DBs
Position
969349..971070
Genome browser
AA seq
573 aa
AA seq
DB search
MIQDIPNFASFNFSDAINKALEDMKFTIPSPIQAQTIPLLLEGKDIIALAQTGTGKTAAF
ALPILQSISPSIQGTQALILAPTRELAIQVAEQFELLSARQRGVTVATLCGGQEYGRQLK
QLRAGAQVVVGTPGRILDHIDKGTLVLNNLRTFILDEADEMLRMGFIEDIETIMAKLPEK
KQIGLFSATMPHRIRQIANTYLQDPVSVEIRAETATVKSIEQRFLFAAGYQKPDALLRVL
AVEEYQGVIIFVRTKSSTEEVAELLQQQGLRAMAIHGDITQALRERIISQFRQGAIDILV
ATDVAARGLDVERVTHVINYDLPHDNETYVHRIGRTGRAGRSGVAILFVTPKESRLISSV
ERHTRQRITKVTVPNDHMIQVARQQRFMANITARLESEHLHSYKKIVEEYIKENEVSAVD
VAATLALLIHKDQPWQQKEQSLPKAARPEREGRGERGSRFDRERSSSRSDDRRSNDRKGF
GEGRKKFNDEGGAEQDLFRIDVGKVHGVKPGNIVGAIANEAGLQSRHITGLKIHDDHSTV
RLPKGMSKDVVNDLTKAWVCGRQLKLTLISSGA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagatataccaaactttgcctcctttaatttttcagatgctataaataaggca
ctggaggatatgaagtttactattccatcacccattcaagctcaaactattccacttttg
ttggaaggaaaagatattattgccttggcgcaaacaggaactggtaagacagcagctttt
gctctaccaattttacaaagcatatctccaagtattcaaggtactcaagcgttgatttta
gcgcctactcgcgaattagcgattcaggttgctgagcaattcgaattattaagtgccaga
caacgtggcgtgactgttgctaccttatgtggtggacaagagtatggccgtcagttaaaa
caattgcgtgctggtgcgcaagtggttgtaggtacgcctggtcgtattttagatcatatt
gataaaggcactttggttttaaataacttacgtacgttcatccttgatgaagctgacgaa
atgttacgcatgggtttcattgaagatattgaaaccattatggcaaaactcccagagaaa
aaacaaattggtctgttttcagcaacaatgccacatcgtattcgtcaaattgccaatact
tatttacaagaccctgtttcagttgaaattcgtgcagaaactgcaacagtaaaaagcatt
gaacagcgtttcttgtttgctgcgggttatcaaaaaccagatgcattattacgtgtttta
gcggttgaggaatatcaaggcgtaattattttcgtgcgtaccaagagcagcacggaagaa
gttgccgagttactgcagcagcaaggtctgcgtgctatggcaatccatggcgatattact
caagccttacgtgagcgcattatttctcagttccgtcaaggagcaatcgatattttagta
gcgactgacgttgctgctcgtggtttagacgttgaacgtgttactcacgtaattaactac
gatttaccacatgataacgagacttatgttcatcgtattggccgaactggtcgagcaggt
cgttctggtgttgctattttgtttgttacaccaaaagaatcacgtttaatcagcagtgtt
gagcgacatacgcgtcagcgtattacgaaagtaaccgtgccgaacgatcatatgattcaa
gttgcacgacaacagcgatttatggcaaatatcacggcgcgtttagagagtgaacattta
cattcatacaaaaagattgttgaagagtacattaaagaaaacgaagtctctgctgttgat
gttgccgctaccttggccttattaattcataaggatcagccatggcagcaaaaagaacaa
tcattgcctaaagctgctcgtcctgaaagagaagggcgtggagagcggggatctcgattt
gaccgtgagcgttcatcctcacgttctgatgatcgtcgttctaatgaccgaaaaggtttt
ggtgaaggccgtaagaaatttaatgatgagggtggtgctgagcaggatttattccgtatt
gacgtgggtaaagtccatggcgtaaaaccaggcaatattgtaggtgcaattgcgaatgaa
gcaggcttacaaagtcgtcatattactggtcttaaaattcatgacgatcattctactgtt
cgcttacccaaaggtatgtctaaagacgtagtgaatgatttaaccaaagcatgggtttgt
ggccgtcaattaaaattaactttaattagtagtggcgcttaa
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