Legionella lytica: J2N86_05325
Help
Entry
J2N86_05325 CDS
T08304
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lly
Legionella lytica
Pathway
lly00260
Glycine, serine and threonine metabolism
lly00460
Cyanoamino acid metabolism
lly00630
Glyoxylate and dicarboxylate metabolism
lly00670
One carbon pool by folate
lly00680
Methane metabolism
lly01100
Metabolic pathways
lly01110
Biosynthesis of secondary metabolites
lly01120
Microbial metabolism in diverse environments
lly01200
Carbon metabolism
lly01230
Biosynthesis of amino acids
lly01240
Biosynthesis of cofactors
lly04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J2N86_05325
09102 Energy metabolism
00680 Methane metabolism
J2N86_05325
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J2N86_05325
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J2N86_05325
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J2N86_05325
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J2N86_05325
Enzymes [BR:
lly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J2N86_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
USQ14726
LinkDB
All DBs
Position
1200629..1201882
Genome browser
AA seq
417 aa
AA seq
DB search
MFDGSYTIENFDKEIFQAIVEEERRQEDHIELIASENYVSPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVAEALAIERAKKLFGADYANVQPHSGSQANAEVMMALLSPGDVILGMA
LPHGGHLTHGSKVNFSGKLYQAVPYGVDETTGLIDYDELERLALEHKPKLIIAGFSAYSR
VLDWPRFREIADKVGAYLMADVAHVAGLIAVGLYPSPVPYADVVTTTTHKTLRGPRGGLI
LCRANEEIEKKLNSAVFPGMQGGPLMHVIAAKAVAFAEALLPEFKTYQEQVLLNAKTMSS
VLISRGYNIVSGGTDNHLLLVDLINKDITGKDADAALGRANITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGFREKEITLLSNWVADILDDINNEATIARVKEDVLRLCREFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggaagctataccatagaaaattttgataaagagatctttcaggcaattgtc
gaggaagaacgtcgacaagaagatcatattgagcttattgcctctgaaaattatgtgagc
ccacgtgtgctagaggctcagggttcagtgctgacgaacaaatatgctgaaggctatccc
ggtaaacgttattatggcggttgcgagtatgtcgatgtggcagaagctctagcaattgaa
cgtgcgaaaaagctgttcggagctgattatgccaatgtacaaccacactctgggtcccag
gctaatgctgaagtgatgatggctttattatctccgggggatgttattttaggtatggca
ttaccccatggtggtcatttaacacacggttctaaagttaatttttctggaaaattgtat
caggcagtgccttatggtgtggatgaaactacgggattaattgactacgatgaattagag
cgtttagctctggagcataagcctaagttaatcattgcaggtttttcagcatattcacgt
gttcttgattggccccgttttcgagagattgcagataaagtaggtgcctacttgatggcg
gatgtggcccacgttgctggcttgatcgcagtcggtctatatccttcacctgtaccttac
gctgatgtagtaaccacaacgacacataagaccttaagaggcccacgtggtggtttgatt
ttatgccgtgcaaatgaggaaattgagaaaaaattaaattcggccgtatttccaggcatg
caaggcggaccgttaatgcatgttattgcagcgaaggcagttgcctttgcggaagcctta
ttacctgaatttaaaacttatcaagaacaagttttgttgaatgctaaaacgatgagctct
gttttaatcagtcggggatataatattgtttccggtggtactgataatcatttactgtta
gttgatttaattaataaggatattactggtaaagatgctgatgccgctttaggccgcgcc
aatattacagtaaacaaaaattcagtacctaatgatccacgctccccatttgttaccagt
ggtttaagattggggactcctgcggttacgacccgaggatttagggaaaaagaaattact
cttctatcaaattgggtagcagatattcttgatgatattaacaatgaagcgactatagcg
cgggttaaagaagatgtattgcgtttgtgtcgtgagtttccggtttataggtaa
DBGET
integrated database retrieval system