Legionella lytica: J2N86_06880
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Entry
J2N86_06880 CDS
T08304
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lly
Legionella lytica
Brite
KEGG Orthology (KO) [BR:
lly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lly03016
]
J2N86_06880
Enzymes [BR:
lly01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
J2N86_06880
Transfer RNA biogenesis [BR:
lly03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
J2N86_06880
Prokaryotic type
tRNA splicing ligases
J2N86_06880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
USQ15013
UniProt:
A0ABY4YBJ5
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All DBs
Position
1541693..1542895
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AA seq
400 aa
AA seq
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MKIITTSNVSIKAWTDGVLFDEEAQKQLKNLATLPFVYKHLAVMPDVHVGKGSTIGTVMA
TRKAIIPAAVGVDLGCGMMAVRTNLMAKDLPDNLSLLRSKIEAAIPVGSSPRQKIGQWNT
IPNYVMQQWNRSLAAPFDKLCEKYPRFIKTNNINHLGTLGGGNHFIELCLDEYQAVWCML
HSGSRGIGNAIGTHFIELAKEDMQRHAIHLPDKDLAYFSEGSTYFHDYCHAVEWAQNFAA
ENRRIMMKCFIDTVSKYLGRDIACNEYSVNCHHNYVQQEQHFGREVWVTRKGAVSAQKGQ
MGIIPGSMGAKSFIVRGLGNPESFHSCSHGAGRVMSRTKAKQLVNLEEHRRALQRVECKK
DASTLDETPSAYKDIDAVMAAQNDLVEIVYTLKQVLCVKG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataattacgacatcaaatgtgtcaattaaggcatggacggatggcgttttattt
gatgaagaggcgcagaaacaacttaaaaatttagctaccttaccttttgtttacaagcac
ttagcggtcatgcctgatgttcatgtagggaagggctctactattggtacggttatggct
acgagaaaagcaatcattccggcggcggtgggcgtagatttgggctgtgggatgatggcg
gttcgaactaatttaatggccaaggatttacctgataacctaagtttactgcgaagtaaa
attgaagcggcaattcctgttggcagcagtcccagacaaaagataggccagtggaacaca
attccaaattatgtaatgcagcaatggaatcgttcgttagccgctccttttgataaactc
tgtgaaaaatatcctcgttttatcaaaacaaataatattaaccatttaggtactttaggt
ggtgggaaccattttattgaactgtgtttggatgaatatcaagccgtatggtgtatgttg
catagtggttcaagaggcattggcaatgccatcgggactcattttattgaattagccaaa
gaagatatgcagcggcatgcaattcatttaccggacaaagacttagcctatttttccgaa
ggaagtacttatttccatgattattgccatgctgttgagtgggcacagaattttgcagca
gaaaatcgtcgtattatgatgaagtgttttatcgatacggtgagcaaatatttaggacgc
gacattgcttgtaatgagtattccgtcaattgtcatcataactatgtacaacaagagcaa
cattttggcagggaggtttgggttactcgtaaaggtgcggtttcggcgcaaaaagggcaa
atgggcataattcctggctcaatgggagcgaagtcattcattgtgcgtggattaggcaat
ccagaaagttttcatagttgcagtcatggtgctgggcgcgtgatgtcgcgcactaaggca
aagcaattggttaatttggaagagcatagacgagcattgcagcgtgtagaatgtaaaaag
gatgccagtactttggatgagacgcccagtgcatataaagatattgatgctgtaatggca
gcacaaaatgatttagttgagattgtttatactttgaagcaggttttatgtgtgaaagga
tag
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