Legionella lytica: J2N86_12150
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Entry
J2N86_12150 CDS
T08304
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lly
Legionella lytica
Pathway
lly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J2N86_12150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lly03019
]
J2N86_12150
Enzymes [BR:
lly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J2N86_12150
Messenger RNA biogenesis [BR:
lly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J2N86_12150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
USQ13427
UniProt:
A0ABY4Y7I4
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All DBs
Position
2756033..2757304
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AA seq
423 aa
AA seq
DB search
MSFTSLGLIEPLLRAVNESGYTEPSPIQAQSIPAILRGHDILASAQTGTGKTASFVLPIL
QKLHEQPRAKGNHAKVLILTPTRELAAQVYDSVKQYGGYTPLRSTVVFGGVKINPQMMKL
RSGVEILVATPGRLLDLHQQRAIQFNEINTLVLDEADRMLDMGFIHDIKRIISMLPRHRQ
NLLFSATFSDGIRTLAKGLLNNPVEIDVSPRNTTAIKIKQTVHPVDKSRKAALLSHLIHK
NKWGQTLVFAKTKHGANKLVKQLSEEHIYAAAIHGNKSQSQRTKALADFKSGELHILVAT
DIAARGIDIDQLPCVVNFDLPQVAEDYVHRIGRTGRAGASGLAVSLVCADEVGQLQAIEK
LIKRKLDRMEIDDFEPNHRLPSSSLPTQVKKGPPKNRKPSPENKKKAENKRFGKNKIKVM
DKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagttttacatccttaggtttaatcgaacctttactacgcgccgttaatgaatcagga
tacaccgagccctcccctattcaagcacaatccattcctgccattttacgtggccatgac
attcttgcctcggcacaaacgggaacgggtaaaactgcaagtttcgtattgcctatttta
caaaaactccacgaacaacctcgcgccaaaggcaatcatgctaaagtattaattctcact
cctacccgtgaactagcggctcaagtgtatgacagcgtgaaacaatacggcggctataca
cctttacgttcaaccgtagtttttggtggcgtaaaaattaatccacaaatgatgaagctc
cgaagcggtgttgagattttagtggcaactcccggacgcttattagacctacaccagcaa
cgagctattcaattcaatgaaattaacaccctggttttagatgaagcggaccgcatgttg
gacatgggctttatccatgacatcaaacgtatcattagcatgctgcccagacatcgtcag
aatttattattttccgcaaccttttctgatggcattcgtactttagcgaaaggattatta
aacaatcctgttgaaatcgatgtatcgcctcgaaatacaaccgccattaaaatcaaacaa
accgtacatcctgtagataaaagccgtaaggcagctttgttaagccatttaattcataaa
aataaatggggacaaactttggtttttgcaaaaaccaaacacggcgctaataaactggta
aaacaattgtctgaagagcatatttatgctgcagccattcatggcaataaatcacaatca
caacgtactaaagccctggctgattttaaatcaggggaattgcatatcctagtcgctaca
gacattgctgctcgcggaattgatattgaccaactgccttgcgttgttaattttgatttg
ccacaagtagcagaagattacgtgcatcgtattggtcgtacaggtcgcgcaggcgcctct
ggtttggcggtttctctagtttgcgctgatgaagttggccaattacaagcgattgaaaaa
ttaattaaacgcaaattagatcgcatggaaattgatgactttgaacctaatcatcgcctt
cccagttcctcattgccaactcaagtgaagaaaggtcctccgaaaaatagaaagccatcg
ccagaaaacaagaaaaaggcagaaaacaagcgattcggaaaaaataagatcaaagtaatg
gataaaaagtga
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