Novilysobacter luteus: LYB30171_00200
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Entry
LYB30171_00200 CDS
T08395
Symbol
xthA_1
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
llz
Novilysobacter luteus
Pathway
llz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LYB30171_00200 (xthA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llz03400
]
LYB30171_00200 (xthA_1)
Enzymes [BR:
llz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LYB30171_00200 (xthA_1)
DNA repair and recombination proteins [BR:
llz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LYB30171_00200 (xthA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CAG4968117
UniProt:
A0ABM8UC72
LinkDB
All DBs
Position
1:complement(207875..208648)
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AA seq
257 aa
AA seq
DB search
MKIASWNVNSLNVRLPHLEQWLQVAAPDVVALQETKLDDERFPDTALAGLGYRSVFAGQK
TYNGVAILSREPAADVQVGIPAFGDEQKRVIAATIGGVRVINLYVVNGQDVGTEKYAYKL
RWLDAVHDWIASELQSHPRVVVLGDFNIAPDDRDVHDPERWNEHHILTSAAERAGLQKLL
DLGLHDAYRLHHDGGGEFSWWDYRQAAFRRNLGLRIDLTLVSGALRAACGAAGIDREPRT
WERPSDHAPVWVELAAP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccagctggaacgtcaactccctcaacgtgcgcctgccccatctggagcag
tggctgcaggttgcggcgcccgacgtggtcgcactgcaggagaccaagctcgacgacgag
cgcttccccgacaccgcgttggcaggactcgggtaccgcagcgtgttcgccgggcagaag
acctacaacggcgtggcgatcctttcgcgcgaaccggccgcggacgtccaggtcggcata
ccggcgttcggcgacgagcagaaacgcgtcatagccgcgaccatcggcggggtgcgcgtg
atcaacctgtacgtggtcaatggccaggacgtcggcacggagaagtacgcgtacaagctg
cgctggctggacgccgtgcacgactggatcgccagcgagctgcagtcgcacccgcgggtg
gtcgtgttgggtgacttcaacatcgcgcccgacgaccgcgacgtgcacgacccggagcgc
tggaacgagcaccacatcctcacctcggcggccgagcgcgccgggctgcagaagctgctc
gacctcggtctgcacgacgcctaccggttgcaccatgacggtggcggcgagttcagctgg
tgggattaccggcaggccgcgttccgccgcaacctgggcctgcggatcgacctgaccctg
gtgtcgggcgccttgcgggcggcgtgtggcgcggccggcatcgaccgcgaaccgcgcacc
tgggagcggcccagcgaccacgcaccggtgtgggtggagctggcggcgccgtag
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