Lysobacter luteus: LYB30171_00814
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Entry
LYB30171_00814 CDS
T08395
Symbol
rpoN_2
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
llz
Lysobacter luteus
Pathway
llz02020
Two-component system
llz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LYB30171_00814 (rpoN_2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LYB30171_00814 (rpoN_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llz03021
]
LYB30171_00814 (rpoN_2)
Transcription machinery [BR:
llz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LYB30171_00814 (rpoN_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_23
Sigma70_r4
HTH_Crp_2
HTH_38
DUF6471
Motif
Other DBs
NCBI-ProteinID:
CAG4970825
LinkDB
All DBs
Position
1:complement(866069..867457)
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AA seq
462 aa
AA seq
DB search
MTPQLQQAIRLLQLSAAELEAELATAVESNPLLDWTESAISAGDTAASAGDGAADANDTS
LDTPAPPEADWTGSDGDTWYQRTGPADPDDDGLQAEQVAESETLHDHLLWQLHLSPLSPR
DRQIAVALIESIDDDGYLRESLDSIASTLGEELHASDDEIKTALCQIQRFDPAGVGARDL
GECLRLQLRTLDEDTPGRELACTLADGPLERLPKIGATGIASEMKLPLEEVETAVQLLRS
LDPRPGAQMGAISTDTYVTPDVVIWRQHGIWRVALSDSMRPRVSIHRGYEGMIQHASAAD
ASYLKGHLQEARWLLKSLEARGETLLKVTRCLLRQQAGFLEFGEGALRPLTLREVAADIG
LHESTVSRAIARKYARTPRGTIPLRAFFASGIGTGGGGEASSTAIQMMIRRLIEAENPRK
PLSDARLAETLKATGVPVARRTVAKYREAMSIPSSQDRVRMA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcagttgcagcaggccatccgcctgttgcagttgtcggccgccgagctggaa
gccgaactggccaccgcggtggaatccaatccgctgctggactggacggaatcggcgatc
agtgccggtgacacggccgcctccgccggtgatggtgccgcggacgcaaacgacacctcg
ctcgacactcccgcgccgcccgaggctgactggaccggcagcgacggcgacacgtggtac
cagcgcacaggcccggccgaccccgacgacgatggcctgcaggccgaacaggtggccgaa
tcggaaaccctgcacgaccacctgttgtggcagttgcacctgagcccgctgtcgccgcgc
gaccggcagattgcagtggcgctgatcgagtcgatcgacgacgacggctacctgcgcgag
tcgctcgattccatcgccagcaccctgggcgaagagctgcacgccagcgacgacgagatc
aagaccgcgttgtgccagatccagcgcttcgatcccgccggggtcggtgcgcgcgacctg
ggcgaatgcctgcgcctgcagctgcgcacgctcgacgaggacaccccgggccgggagctc
gcctgcacgctggccgacggcccgctggaacggctgccgaagatcggcgcgaccggtatc
gcgagcgaaatgaaactcccgctggaggaggtcgagacggcggtgcaactgctgcgctcg
ctcgatccgcgcccgggcgcgcagatgggcgccatctcgaccgatacctacgtcactccg
gatgtcgtgatctggcgccagcacggcatctggcgggtcgcgctgtcggacagcatgcgg
ccgcgcgtcagcatccaccgtggctacgaggggatgatccagcacgccagcgcggccgat
gccagctacctcaagggccacctgcaggaggcgcgctggctgctcaagagcctggaagcc
cgcggcgagaccctgctcaaggtcacccgctgcctgctgcggcaacaggccggcttcctc
gagtttggcgagggcgcgctgcgtccactgacgctgcgcgaggtcgccgccgacatcggc
ctgcatgaatccacggtttcacgcgcaatcgcacgcaagtacgcgcgcaccccgcgcggc
accattccgttgcgcgcgttcttcgcctccggcatcggcaccggcggcggcggggaagcg
tccagcaccgctatccagatgatgatccggcgcctgatcgaagcggagaacccgcgcaaa
ccgctgtcggacgcgcgcctggccgaaaccctcaaagccaccggcgtgccggtggcgcgg
cgcacggtggccaagtaccgcgaggcgatgagcatcccgtcttcacaggaccgcgtgcgc
atggcctga
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