Novilysobacter luteus: LYB30171_01544
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Entry
LYB30171_01544 CDS
T08395
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
llz
Novilysobacter luteus
Pathway
llz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LYB30171_01544 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llz03019
]
LYB30171_01544 (pnp)
03016 Transfer RNA biogenesis [BR:
llz03016
]
LYB30171_01544 (pnp)
Enzymes [BR:
llz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LYB30171_01544 (pnp)
Messenger RNA biogenesis [BR:
llz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LYB30171_01544 (pnp)
Transfer RNA biogenesis [BR:
llz03016
]
Prokaryotic type
tRNA degradation factors
LYB30171_01544 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_NusA_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
CAG4973863
UniProt:
A0ABM8UFX4
LinkDB
All DBs
Position
1:complement(1660351..1662459)
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AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHQVTLETGEIARQAGGAVIVKVEDTVLLVSAVANKTAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEGFRNEVQIIATVMSMN
PEIDGDIPALLGASAALALSGAPFDGPIGAAKVGYKDGQYLLNPSKSELEDSKLELVVAG
TQAAVLMVESEADVLSEDVMLGAVMFGHKEMQVAINAINELVAEAGKPKWDWAAPARSDA
IVGALKGAIGDRLSAAFQIRNKAERRDAISALKKEVLASLADQIESNEWNPAEVSKEFGE
LEYETMRGAVLSTKIRIDGRNLDTVRPIASKVSILPRVHGSALFTRGETQAIVAVTLGTA
RDGQIIDAVSGEYKEHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTSEGISALQMDIKIQGITEEIMKTALAQAKAGRLHILGEMAN
ALTNPRDELSEFAPRLITIKIHPDKIREVIGKGGSVIQAITKETGTQIDIQDDGTITIAS
VNAIAGQAAKDRIEQITSDVEPGRIYEGKVAKIMDFGAFVTISPGKDGLVHVSQISNDRV
EKVSDVLKEGDVVKVKVLEVDKQGRIRLSMKAIEEGEGTPAS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattaccaagaccttccagtacggcaagcaccaggtcaccctggaaaccggc
gagatcgcccgccaggccggcggcgccgttatcgtcaaggttgaagacaccgtgctgctg
gtcagcgccgtcgccaacaagaccgcgcgcgagggccaggacttcttccccctgaccgtc
gactaccaggagaagttctacgccggcggccgcatcccgggtggcttcttcaagcgcgag
ggccgcgcgaccgagaaggagacgctgatctcgcgcctgatcgatcgcccgatccgtccg
ctgttcccggaaggcttccgcaacgaagtccagatcatcgccaccgtgatgtcgatgaac
ccggaaatcgacggcgacatcccggcgctgctgggcgcgtccgccgcgctcgcgctttcg
ggcgcgccgttcgatggcccgatcggcgccgcgaaggtcggttacaaggacggccagtac
ctgctcaacccgagcaagagcgagcttgaggattccaagctcgagctggtcgtcgccggt
acccaggccgccgtcctgatggtcgagtccgaagccgacgtgctgtcggaagacgtgatg
ctcggcgcggtgatgttcggccacaaggaaatgcaggtcgcgatcaacgcgatcaacgag
ctggtcgccgaagccggcaagccgaagtgggactgggcggcgcccgcccgcagcgacgcc
atcgtcggcgcgctcaagggtgccatcggcgaccgcctgtcggccgccttccagatccgc
aacaaggccgagcgtcgcgacgccatctccgcgctcaagaaggaagtgctggcatcgctg
gccgaccagatcgagtccaacgagtggaaccccgccgaagtctccaaggagttcggcgag
ctcgagtacgagaccatgcgtggcgccgtgctcagcaccaagatccgcatcgacggccgc
aacctcgacaccgtgcgcccgatcgcctcgaaggtcagcatcctgccgcgcgtgcacggc
tcggcgctgttcacccgcggcgagacccaggcgatcgtcgccgtcacccttggtaccgcg
cgcgacggccagatcatcgatgccgtgtcgggcgagtacaaggagcacttcctgttccac
tacaacttcccgccctattcggtcggtgaagccggccgcatgatgggtccgaagcgtcgc
gagatcggccacggccgccttgccaagcgcggcgtgctggccgtgatgccgacgatggag
gagttcccgtacaccatccgcgtcgtctcggagatcaccgagtcgaacggttcgtcgtcg
atggcctcggtctgcggcagctcgctggcgctgatggatgccggcgtgccgatcaaggcg
ccggttgccggcatcgcgatgggcctggtgaaggaaggcgacgatttcgtcgtgctgtcc
gacatcctgggcgacgaggaccacctcggcgacatggacttcaaggtggccggcacgagc
gagggcatctccgccctgcagatggacatcaagatccagggcatcaccgaggagatcatg
aaaaccgcgctggcccaggccaaggccggtcgcctgcacatcctcggcgagatggccaac
gcgctgaccaacccgcgtgacgagctgtccgagttcgcgccgcgcctgatcacgatcaag
atccaccccgacaagatccgcgaagtgatcggcaagggcggttcggtgatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcacgatcacgatcgcctcg
gtcaacgcgatcgccggccaggccgccaaggaccgcatcgagcagatcacctccgacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
acgatctcccccgggaaggacggcctggtgcacgtctcgcagatctccaacgatcgcgtc
gagaaggtcagcgacgtgctcaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccatcgaggaaggcgagggcaccccg
gccagctga
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integrated database retrieval system
