Novilysobacter luteus: LYB30171_01589
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Entry
LYB30171_01589 CDS
T08395
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
llz
Novilysobacter luteus
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llz03009
]
LYB30171_01589 (rimO)
Enzymes [BR:
llz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LYB30171_01589 (rimO)
Ribosome biogenesis [BR:
llz03009
]
Prokaryotic type
ribosomal protein modification factors
LYB30171_01589 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CAG4974074
UniProt:
A0ABM8UFZ6
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All DBs
Position
1:complement(1707772..1709118)
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AA seq
448 aa
AA seq
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MSVPHAPTKNPKVGFVSLGCPKALVDSERILTQLRVEGYDLVPTYDDADVVVVNTCGFID
SAVAESLDAIGEAMAENGKVIVTGCLGKREEVIREAHPGVLSISGPQDYDSVLGAVHKAL
PPRHDPFISLVPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDQVLREA
EKLAMGGVKELLVISQDTSAYGVDVRYAEREWRGRAYQTRMKALCEGLGELGLWTRLHYV
YPYPHVDEIIPLMAEGRILPYLDIPFQHASPRVLKLMKRPGAVDKTLERIRRWRDVCPEL
TIRSTFIVGFPGETDAEFEELLDFLDEAQLDRVGAFAYSPVEGAKANALPDPVPEALKQE
RLARFMERQAGISEAKLEAKVGSIQRCIVDAVDGELAIARSMADAPEIDGLVQIQNGYFA
GLKPGDFCDVEIMGSDEHDLFGEVVFGD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttccccacgcccctaccaagaaccccaaagtcggcttcgtcagccttggttgc
cccaaggcgctcgtcgactccgagcgcatcctgacccagctgcgggtcgagggttacgac
ctggtgccgacgtacgacgatgccgacgtggtggtggtcaacacctgcggcttcatcgac
tcggcggtcgccgaatcgctcgacgcgatcggcgaggcgatggccgagaatggcaaggtc
atcgtcaccgggtgcctgggcaagcgggaggaggtcatccgcgaggcgcatccgggcgtg
ctgtcgatcagcgggccgcaggactacgacagcgtgctgggcgcggtgcacaaagccctg
ccgccgcgccacgatccgttcatcagcctggtcccggacaccggcatcaagctgacgccc
aagcactacgcctacctgaagatttccgaaggctgcaaccaccgctgcagcttctgcatc
atcccgtcgatgcgcggcgaccttgtctcgcgcccggtcgaccaggtcctgcgcgaggcc
gaaaagctcgcgatgggtggggtgaaggagctgctggtgatctcgcaggacacgtccgcc
tatggcgtcgacgtccgctatgccgagcgcgagtggcgcggccgggcgtaccagacacgg
atgaaggcgttgtgcgaagggctcggcgagctcggcctgtggacgcgcctgcactacgtg
tatccgtacccgcacgtcgacgagatcatcccgctgatggccgagggacggatccttccg
tacctggacattccgttccagcacgccagtccgcgggtactgaagctgatgaagcgcccg
ggcgcggtcgacaagaccctggagcggatccgccggtggcgcgatgtgtgcccggagctg
accatccgctcgaccttcatcgtcggcttcccgggcgagaccgacgcggagttcgaggag
ctgctggacttcctcgacgaggcccagctggaccgggtgggcgcgttcgcctactcgccg
gtggagggtgcgaaggccaacgcgttgcccgaccccgtgccagaggcgctcaagcaggag
cgcctggcgcgcttcatggagcggcaggcggggatttccgaggccaagctcgaggccaag
gtcggcagcatccagcgctgcatcgtcgacgcggtcgacggtgagctggcgatcgcgcgt
tccatggccgatgcacccgagatcgacggcctggtgcagatccagaacggctacttcgcc
ggcctcaagccgggcgacttctgcgatgtcgagatcatgggcagcgacgagcacgacctg
ttcggcgaggtcgtgttcggggactga
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