Novilysobacter luteus: LYB30171_01757
Help
Entry
LYB30171_01757 CDS
T08395
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
llz
Novilysobacter luteus
Pathway
llz03030
DNA replication
llz03430
Mismatch repair
llz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYB30171_01757 (dnaE)
03430 Mismatch repair
LYB30171_01757 (dnaE)
03440 Homologous recombination
LYB30171_01757 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llz03032
]
LYB30171_01757 (dnaE)
03400 DNA repair and recombination proteins [BR:
llz03400
]
LYB30171_01757 (dnaE)
Enzymes [BR:
llz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYB30171_01757 (dnaE)
DNA replication proteins [BR:
llz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LYB30171_01757 (dnaE)
DNA repair and recombination proteins [BR:
llz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LYB30171_01757 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAG4974819
UniProt:
A0ABM8UGH3
LinkDB
All DBs
Position
1:1889960..1893481
Genome browser
AA seq
1173 aa
AA seq
DB search
MSASPFVHLHLHSEFSLADSTIRVGELVKRCVELEQPAVALTDLNNLFAAVKFYRKAEGA
GIKPILGADIGLADGNETPSRLTLLCRDHEGYLTLSRLLSRMWMEGHRMDGVAMRPEWLR
EDNAGLFALAGRQSLAGRLAMGHRPELAEAWIADWQGEFGDRLHLELTRTGREGEQVFND
LALHLSGKRGLPVVASNDARFLHADGFEAHEARVCISTGRVLDDPKRPKEYSPEQYLRSS
EEMARLFADVPDAIDNAVALATRCNVEMQLGTYYLPAFPVPDDHTIESWLRSQSREGLAQ
RLEKAPLAEGRTRQDYEERLETELDVIIKMGFPGYFLIVADFINWGKEQGIPVGPGRGSG
AGSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRD
RVSQIITYGTMAAKAVVRDAGRVLGHPYGFVDGIAKLIPNTLGISLDDALGESEASHKNP
MLASTDLIERYQREDEVRDLLDLARSLEDLTRNAGKHAGGVVIAPSPLHDFCPLFAEHDG
EGRGKSPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRRAAAGEAPLDITALP
LDDRASYELFARGDTVAVFQFESRGMRELLKRAQPDTFEDIIALAALFRPGPLGSGMDKD
WVDRKHGREAVTYPHESLEPVLSPTYGVIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKK
KAEEMAKERAKFEAGCEERGIPARIASPIFDLMEKFAEYGFNKSHSAAYALVAYQTAWLK
VHYPAEFMAAVLSSDMDNTDKVTGFLDECRVMGLEVLPPDVDASAYMFEAVAPGVIRYGI
GAVKGVGRGACESIVDARRAGPFNDLLDFCKRVDGNKLNRRTVEALIMAGALDKLGKNRA
SLMLQLPEVLKATDQLARERAAGQVSLFGGGDTAVPALKLDLPETDEYPLGHLLNGERET
LGHYLSGHPFDPYRDELHALTGHDLGDLEKIWENRPESARSGWRPELETVVAGQVVGLRK
KGDSQMFVQIEDGRGRLEVAFFSETYSDYATLLTRDRLLVIQGGLREDAFSGGFALKAAR
CWDYEQICATHAKRLSLRLDLRVPGTWNRVDALLAKHRPGKTPIRVDLIKAGAAGMLDLN
GSSSVRVDAELVGTLKAVPGVKAVKLALGRPWG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatcgcccttcgtacaccttcacctccacagcgaattctcccttgccgactcc
accatccgggtcggcgagctggtcaagcgctgcgtggagctcgagcagccggccgtcgcg
ctgaccgacctcaacaacctgttcgccgcggtcaagttctaccgcaaggccgagggtgcc
ggtatcaagccgatcctgggcgccgacatcgggctggccgacggcaacgagacgccgtcg
cggctgaccctgctgtgccgggaccacgagggctacctcacgctctcgcgcctgctcagc
cgcatgtggatggaaggccaccgcatggacggcgtggcgatgcgcccggaatggctgcgc
gaggacaatgccggcctgttcgccctcgccggccgacagagcctggcggggcggctggcc
atgggccaccgcccggaactggccgaagcctggatcgccgactggcagggcgagttcggc
gaccgcctgcaccttgagctgacccgcaccggccgcgagggtgagcaggtcttcaacgac
ctcgccctgcacctgtcgggcaagcgcggcctgccggtggtcgccagcaacgacgcgcgc
ttcctgcatgccgacggcttcgaggcgcacgaggcgcgcgtgtgcatctccaccggccgc
gtgctcgacgacccgaagcggccgaaggagtacagccccgagcagtacctgcgctcgtcc
gaggaaatggcgcggctgttcgccgacgtgcccgacgcgatcgacaacgcggtcgcactg
gccacccgctgcaatgtcgagatgcagctgggcacctattacctgcccgccttcccggtg
cccgacgaccacaccatcgagtcctggctgcgcagccagtcgcgcgaggggctggcccag
cggctggagaaggcgccgctggccgagggacggacgcgccaggactacgaggagcgcctg
gaaaccgagctcgacgtcatcatcaagatggggttccccggttacttcctgatcgttgcg
gacttcatcaactggggcaaggaacagggcatcccggtcgggccgggccgtggttccggt
gccggctcgctggtggcgtgggcgctgggcatcaccgacctggacccgctgccgtacgac
ctgctgttcgagcgcttcctcaaccccgaacgcgtgtcgatgcccgacttcgacatcgac
ttctgcatggaccggcgcgacgaggtcatcgactacgtcgcccgcaagtacggccgcgac
cgggtcagccagatcatcacctacggcaccatggccgcgaaggccgtggtgcgcgacgcc
ggccgcgtgctcggccacccgtacggcttcgtcgacggcatcgccaagctgatccccaac
acgctgggcatcagtctcgacgatgcgctcggtgaatcggaggcctcgcacaagaacccg
atgctggcctcgaccgacctgatcgagcgctaccagcgcgaggacgaggtccgcgacctg
ctcgacctcgcccgctcgctcgaggacctcacccgcaacgccggcaagcacgccggcggc
gtggtcatcgcgcccagcccgctgcacgacttctgcccgctgttcgccgaacacgacgga
gaaggccgcggcaagagcccggtcacccagttcgacaaggacgacgtcgaagccgtcggc
ctggtgaagttcgacttcctcggcctgcgcacgctgacgatcatcgactgggcggtgaag
gccatcaacgtccggcgcgccgccgccggcgaagcaccgctcgacatcacggcgctgccg
ctggacgaccgcgccagctacgagctgttcgcacgcggcgacaccgtcgcggtgttccag
ttcgaatcgcgcggcatgcgcgagctgctcaagcgtgcccagcccgacaccttcgaggac
atcatcgcgctggccgccttgttccgccccggcccgctcggctcggggatggacaaggac
tgggtcgaccgcaagcacggccgcgaggccgtcacctatccgcatgaatcgctggaaccg
gtgctgtcgccgacctacggcgtcatcgtgtaccaggaacaggtgatgcagatcgcccag
gtgatggccggctactcgctcggcggcgccgacctgctgcgccgcgcgatgggcaagaag
aaagccgaggagatggccaaggagcgggccaagttcgaggccggctgcgaggagcgcggc
atcccggcgcgcatcgccagcccgatcttcgacctgatggagaagttcgccgagtacggc
ttcaacaagtcgcactcggccgcctacgcgctggtcgcctaccagaccgcctggctgaag
gtgcactacccggccgagttcatggccgcggtgctgtcgtcggacatggacaacaccgac
aaggtcaccggcttcctcgacgaatgccgggtgatgggattggaggtgctgccgccggac
gtcgacgcgtcggcctacatgttcgaggccgtggcgcccggcgtgatccgctacggcatc
ggcgcggtgaagggcgtcggccgcggcgcgtgcgagtcgatcgtcgatgcgcgccgtgcg
ggcccgttcaacgacctgctcgacttctgcaagcgcgtcgacggcaacaagctcaaccgc
cgcaccgtcgaggcgctgatcatggcaggtgcgctcgacaagctcgggaagaaccgcgcc
agcctgatgctgcagctgcccgaggtactcaaggcgaccgaccagctcgcccgcgaacgc
gccgccggccaggtgtcactgttcggcggcggcgacaccgcggtcccggcactgaagctc
gacctgcccgagaccgacgaatacccgctcggccacctgctgaacggcgagcgcgagacg
ctgggccactacctcagcggccacccgttcgacccctatcgagacgaactgcacgccctc
accggccatgacctcggcgacctcgagaagatctgggagaaccgccccgagtccgcccgc
agcggctggcgccccgagctggaaaccgtggtcgccggccaggtcgtcggcctgcgcaag
aagggcgacagccagatgttcgtgcagatcgaggacggccgcggccggttggaggtcgcc
ttcttctccgaaacctacagcgactacgccaccctgctgacccgcgaccgcctgctcgtg
atccagggcggcctacgcgaggacgcgttcagcggcggcttcgccctcaaggccgcgcgc
tgctgggattacgagcagatctgcgcgacccacgccaagcggttgtcgctaaggctggac
ctgcgcgtgccggggacgtggaaccgggtggatgcgctgctggcaaagcaccgtcccggc
aagacgcctatccgcgttgacctgatcaaagcgggggccgcgggaatgctggatttgaat
ggcagcagctcggtgcgggtggatgcggagctggtgggaacgttgaaggcggtaccgggg
gtcaaagcggtgaagctggcgcttgggcggccttgggggtaa
DBGET
integrated database retrieval system
