KEGG   Novilysobacter luteus: LYB30171_01944
Entry
LYB30171_01944    CDS       T08395                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
llz  Novilysobacter luteus
Brite
KEGG Orthology (KO) [BR:llz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:llz03016]
    LYB30171_01944 (truD)
Enzymes [BR:llz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     LYB30171_01944 (truD)
Transfer RNA biogenesis [BR:llz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LYB30171_01944 (truD)
 Prokaryotic type
    LYB30171_01944 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: CAG4975515
LinkDB
Position
1:complement(2072576..2073661)
AA seq 361 aa
MSDLPPPSGGNNNDDGAGRLPRASGPAVLAARIRATPEDFRVDEVPGFEPSGSGEHLLLD
VEKRGMNTAFAARHIAAWAGVPESAIGYAGLKDRHAVTRQRFSVHLPKRSAPELATLERD
EAGEHLRVLGHAWHSRKLPRGALAGNRFVLVLRELQGDRAAIDRRLEVIATRGVPNYFGE
QRFGRGGDNLTHALAMFAGRRVGREQRGMLLSAARSEMFNRVLAARVQSGDWDTGMAEGE
VWMLDGSRSVFGPEPLDEALAARVAAFDIHPTGPLWGRGDLRCTGPVAALEQATLADGTA
MRVREGLEKAGLKQERRALRLRPADLSWDWLSPDALRLEFTLPAGTYATVVLAELGEIRV
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagtgacctgccgccgccgtcgggcggtaacaacaacgacgacggcgccggccggctc
ccgcgcgcgtcgggtccggcggtgctggcggcgcgcatccgcgccactccggaagatttc
cgcgtcgacgaggtgccggggttcgaaccgagcggcagcggcgagcacctgctgctggat
gtcgagaagcgcggcatgaataccgcgttcgcggcccggcatatcgccgcatgggccggc
gttccggaaagtgcgatcgggtacgccgggttgaaggaccgccacgcggtgacccgccag
cgtttcagcgtgcacctgccgaaacggtcggcgccggagctggccacgctcgagcgcgac
gaagccggcgagcacctgcgcgtgctgggccatgcctggcattcgcgcaagctgccgcgt
ggcgcgctcgcgggtaaccggttcgtgctggtgctgcgcgagctgcagggcgaccgtgcg
gcgatcgaccgccggctcgaagtgatcgctacgcgtggcgtgcccaactacttcggcgag
cagcgcttcggccgcggcggcgacaacctcacccacgcactggcgatgttcgccggtcgc
cgtgtcggtcgcgagcagcgcggcatgttgctgtcggccgcccgctcggaaatgttcaac
cgcgtgctggccgcccgcgtgcagtcaggcgactgggacaccggcatggccgagggcgaa
gtctggatgctcgacggcagccgcagcgtgttcggacccgagccgctcgacgaagctctg
gcggcccgcgttgccgctttcgacatccatccgaccggcccgctgtggggtcgcggcgac
ctgcgctgcaccggcccggtggctgcgctggaacaggcaaccctggccgacgggacggcg
atgcgcgtgcgcgaaggcctcgaaaaggccggcctgaaacaggagcgccgcgcgttgcgc
ctgcgcccagcagacctgtcgtgggactggctgtcgccggatgccctgcggctcgagttc
accctgccggccggcacctacgccacggtggtgctggcggaactcggcgagatccgcgtg
ccctga

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