Novilysobacter luteus: LYB30171_02044
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Entry
LYB30171_02044 CDS
T08395
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
llz
Novilysobacter luteus
Pathway
llz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LYB30171_02044 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llz03021
]
LYB30171_02044 (rpoA)
03400 DNA repair and recombination proteins [BR:
llz03400
]
LYB30171_02044 (rpoA)
Enzymes [BR:
llz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LYB30171_02044 (rpoA)
Transcription machinery [BR:
llz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LYB30171_02044 (rpoA)
DNA repair and recombination proteins [BR:
llz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LYB30171_02044 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CAG4975903
UniProt:
A0ABM8UH71
LinkDB
All DBs
Position
1:complement(2179850..2180848)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLAGNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHTGESATLSLAKQGPGIVTAADIKTDHN
VEILNGEHVIAHLTKDTALNMRLKIERGYGYQPAAARRRPDEETRSIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPASNGVDPILLRPIDDLELTVRSANCLKAESIYYVGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGIASHGMMG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaatcaggtactgcgtccccgcggtccccagatcgaacgcctcgca
ggaaaccgcgcgaaggtcgtgatcgagccgctcgagcgcggctacggccacaccctcggc
aacgcgctgcgtcgcgtgctgctgtcctcgatccccggcttcgccatcaccgaagtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaggggctgcaggaggacgtgctcgaa
gtcctgctcaacctcaaggacgtcgcgatccgcatgcacaccggcgagtcggcgacgctc
tcgctggccaagcagggtcccggcatcgtcaccgcggccgatatcaagaccgaccacaac
gtcgagatcctcaacggtgagcatgtcatcgcccacctgaccaaggacacggcgctgaac
atgcggctcaagatcgagcgtggctacggctaccagccggccgccgcgcgtcgccgcccc
gacgaggagacccgttcgatcggccgcctgatgctggatgccagcttcagcccggttcgt
cgcgtcgcctacgccgtcgaagccgcccgcgtcgagcagcgcaccgacctcgacaagctc
gtgatcgacatcgagaccaacggcacgatcgacgccgaggaagccgtgcgcaccgccgcc
gacatcctcagtgaccagctgtcggtgtttggcgacttcacccaccgcgaccgcggtgcg
gcgaagccggccagcaacggggtcgacccgatcctgctgcgcccgatcgacgacctggag
ctgaccgtgcgttcggccaactgcctcaaggccgagagcatctactacgtcggcgatctg
atccagaagaccgaagtcgaactgctcaagacgccgaacctcggcaagaagtcgctcacc
gagatcaaggaagtcctcgcccagcgcggcctttcgctcggcatgaagctcgagaactgg
ccgccggcggggattgcctcgcacggcatgatgggatga
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