Novilysobacter luteus: LYB30171_02075
Help
Entry
LYB30171_02075 CDS
T08395
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
llz
Novilysobacter luteus
Pathway
llz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LYB30171_02075 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llz03021
]
LYB30171_02075 (rpoB)
03400 DNA repair and recombination proteins [BR:
llz03400
]
LYB30171_02075 (rpoB)
Enzymes [BR:
llz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LYB30171_02075 (rpoB)
Transcription machinery [BR:
llz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LYB30171_02075 (rpoB)
DNA repair and recombination proteins [BR:
llz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LYB30171_02075 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
CAG4976007
UniProt:
A0ABN7R015
LinkDB
All DBs
Position
1:complement(2202733..2206902)
Genome browser
AA seq
1389 aa
AA seq
DB search
MTTASTTNYSFTEKKRIRKDFGKRKSILEVPFLLAIQVDSYRAFLQEHTDPAKREDRGLH
AALKSVFPISSYSGNAALEYVGYKLGEPAFDERECRTRGMSYGAPLRVTVRLVIYDRESS
TKAIKYVKEQEVYMGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKL
LYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTVLLRALGYNNEEMLAEFFEVNTF
HIDPKEGVQLELVPERLRGETLDFDLADGDKVIVEAGRRITARHVKQLEASGIEALAVPD
AYLVGRILSHDVVDAGTGELIANANDEITEEQLEALRKAGIETVGTIWVNDLDRGPFISN
TLRIDPSKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFDRYDLSAVGRMKFNRRI
GRKETTGASVLYDAKYYGERKDEESKRLAAECGEGSDILDVIKVLTEIRNGRGVVDDIDH
LGNRRVRSVGEMAENTFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFG
SSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGP
NIGLINSLAVFARTNSYGFLETPYRKVVDGKVTDDVEYLSAIEENEYVIAQANATQDEKG
KLSAQFVACRYQGENLLKPPSEIHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQR
QAVPTLRAQKPLVGTGIERAVARDSGVTVNARRGGVIEQIDAGRIVVKANEDEISGETDA
GVDIYNLIKYTRSNQNTCINQRPLVNVGDVVARGDVLADGPSTDIGELALGQNMLVAFMP
WNGYNFEDSILLSERVVQEDRYTTIHIEELTAVARDTKLGPEEISADIPNVSEQALNRLD
ESGVVYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDG
TVIDVQVFTRDGIEKDKRAKQIEESEVRRVKKDFDDQFRILEAAIYDRLRSQLIGKTANG
GAGLKKGETVTSLVLDGLSRKDWFSLRMKDEEAVEAIERAQKQIAAHEQEFERRFADKRG
KITQGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSTIVPVQDMPYMADGQTV
DIVLNPLGVPSRMNIGQILEVHLGWAAKGLGQKIQRMLEAQAKVAELRKFLDEIYNHDHK
LQGERVDLKQFSDKELLTLAQNLTDGVPMATPVFDGAAESELKAMLRLADLPESGQTVLH
DGRTGEAFEREVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEM
EVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEYEMVAGMPESFNVLVKEIRSL
AINMELEET
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagcttccacgacgaattattcgttcaccgagaagaagcgcatccgcaaggac
ttcggcaagcgcaagtccatcctcgaagtgcccttcctgctcgccatccaggtcgactcg
taccgcgcgttcctgcaggagcacaccgatcccgccaagcgcgaggaccgtggcctgcac
gccgcgctcaagtcggtgttcccgatttcgagctacagcggcaacgccgcgctggagtac
gtgggctacaagctgggcgaacccgcgttcgacgagcgcgagtgtcgtacccgtggcatg
agctacggcgcaccgctgcgcgtcaccgtgcgcctggtgatctacgaccgcgagtcgtcg
accaaggccatcaagtacgtgaaggagcaggaggtctacatgggcgagatcccgctcatg
accgagaacggcaccttcatcgtcaatggcaccgagcgcgtcatcgtctcgcagctgcat
cgcagcccgggcgtgttcttcgaccacgaccgcggcaagacccacagctcgggcaagctg
ctgtacagcgcccgcattatcccgtaccgcggctcgtggctggacttcgagttcgacccg
aaggacgcgctgttcacccgtatcgaccgtcgccgcaagctgccggtgaccgtgctgctg
cgcgcgctgggctacaacaacgaagagatgctggccgagttcttcgaggtcaacaccttc
cacatcgacccgaaggaaggcgtgcagctggagctggtgcccgagcgcctgcgcggcgag
accctcgacttcgacctggccgatggcgacaaggtcatcgtcgaggccggccgccgcatc
actgcgcgccacgtcaagcagctcgaggcctccggcatcgaagcgctggccgtgcccgac
gcctacctggtcggccgcatcctgtcgcacgacgtggtcgacgcgggcaccggcgagctg
atcgcgaacgccaacgacgagatcaccgaggagcagctcgaggccctgcgcaaggcaggc
atcgagaccgtcggcaccatctgggtcaatgacctggaccgcggtccgttcatctccaac
accctgcgcattgacccgagcaagacccagctcgaggcgctggtcgagatctaccggatg
atgcgtccgggcgagccgccgaccaaggacgccgcgcagaacctgttccacaacctgttc
ttcaccttcgaccgctacgacctgtcggccgtcggccggatgaagttcaaccgccgcatc
ggccgcaaggaaaccaccggcgcttcggtgctatacgacgccaagtactacggcgagcgc
aaggacgaggagtccaagcgtctggccgccgagtgcggtgaaggttccgacatcctcgac
gtgatcaaggtcctgaccgagatccgcaacggccgtggcgtggtggacgacatcgaccac
ctcggcaaccgccgcgtgcgttcggtcggcgaaatggccgagaacaccttccgcgtcggc
ctggtccgcgtggagcgcgcggtcaaggagcgcctgtcgatggccgagtccgaaggcctg
accccgcaggagctgatcaacgccaagccggtggccgccgcgatcaaggagttcttcggc
tcctcgcagctgtcccagttcatggaccagaacaacccgctctcggaagtgacccacaag
cgtcgcgtctcggccctcggcccgggcggcctgacccgtgagcgcgccggcttcgaagtg
cgcgacgtgcacccgacccactacggccgcgtctgcaccatcgaaacgcctgaaggcccg
aacatcggcctgatcaactcgctggccgtgttcgcccgcaccaacagctacggcttcctc
gagacgccgtaccgcaaggtggtggacggcaaggtcaccgacgacgtcgagtacctgtcg
gcgatcgaggagaacgagtacgtcatcgcccaggccaacgcgacccaggacgagaagggc
aagctgtcggcccagttcgtcgcctgccgctaccagggtgagaacctgctcaagccgccg
agcgagatccacttcatggacgtctcgccgatgcagaccgtgtcggtggccgccgcgctg
gtgccgttcctcgagcacgatgacgccaaccgtgcgctgatgggcgccaacatgcagcgc
caggccgtgccgacgctgcgtgcgcagaagccgctggtcggcaccggcatcgagcgtgcc
gtggcgcgcgactccggcgtgaccgtcaacgctcgccgtggcggcgtgatcgagcagatc
gacgcaggccgcatcgtggtcaaggccaacgaggacgagatctcaggtgagaccgatgcc
ggcgtcgacatctacaacctgatcaagtacacgcgctccaaccagaacacctgcatcaac
cagcgcccgctggtgaatgtcggtgacgtggtcgcgcgcggcgacgtgctggccgacggt
ccctcgaccgacatcggcgagctcgcgctgggccagaacatgctggtcgcgttcatgccg
tggaacggctacaacttcgaggactccatcctcctgtccgagcgcgtggtccaggaagac
cgctacaccacgatccacatcgaggagctgaccgcggtcgcccgcgacaccaagctcggg
ccggaggaaatctccgccgacatcccgaacgtctccgagcaggccctcaaccgcctcgac
gagtcgggcgtggtgtacatcggtgccgaggtccgggccggcgacatcctggtcggcaag
gtcacgccgaagggtgagagccagctgaccccggaagagaagctgctgcgggcgatcttc
ggtgagaaggcgtccgacgttaaggacagctcgctgcgcgtgccgccgggcatggacggc
accgtcatcgacgtgcaggtcttcacccgcgacggaatcgagaaggacaagcgcgccaag
cagatcgaggagtccgaggtccgccgcgtcaagaaggacttcgacgaccagttccgcatc
ctcgaggcggcgatctacgaccgcctgcgcagccagctgatcggcaagaccgccaatggc
ggtgccggcctcaagaagggcgaaaccgtcacttcgctggtgctcgatggcctgagccgg
aaggactggttcagcctgcgcatgaaggacgaggaagcggtcgaggcgatcgagcgcgcg
cagaagcagatcgccgcgcacgagcaggagttcgagcgccggttcgccgacaagcgcggc
aagatcacccagggtgacgacctcgccccgggcgtcctcaagatggtcaaggtcttcctc
gctgttaagcgccgcatccagccgggcgacaagatggccggccgccacggcaacaagggt
gtcgtgtcgaccatcgtgccggtgcaggacatgccgtacatggccgatggccagaccgtc
gacatcgtcctcaacccgctgggcgtgccgtcgcgtatgaacatcgggcagatcctcgag
gtccacctgggctgggccgccaagggcctgggccagaagatccagcggatgctcgaggcg
caggccaaggtggccgagctgcgcaagttcctcgacgagatctacaaccacgaccacaag
ctgcagggcgagcgcgtcgacctcaagcagttcagcgacaaggaactgctgaccctcgcg
cagaacctcaccgacggcgtgccgatggccaccccggtgttcgacggcgcggcggagtcc
gagctcaaggcgatgctgcgcctggccgacctgcccgagagcggccagaccgtgctgcac
gacggtcgcaccggcgaggccttcgagcgcgaggtgacggtcggctacatgcacatgctg
aagctgaaccacctggtcgacgacaagatgcacgcgcgttcgaccggtccgtactcgctc
gtcacccagcagccgctgggcggcaaggcgcagttcggcggccagcgtttcggcgaaatg
gaagtctgggcgctggaagcctacggcgcggcctacaccctgcaggaaatgctgacggtg
aagtccgacgacgtgcagggccgtaaccagatgtacaagaacatcgtcgacggcgagtac
gagatggtcgccggcatgccggagtccttcaacgtactggtgaaggagatccgctcgctc
gcgatcaacatggagctggaagagacctga
DBGET
integrated database retrieval system
