Novilysobacter luteus: LYB30171_02178
Help
Entry
LYB30171_02178 CDS
T08395
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
llz
Novilysobacter luteus
Pathway
llz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LYB30171_02178 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llz03019
]
LYB30171_02178 (recQ)
03400 DNA repair and recombination proteins [BR:
llz03400
]
LYB30171_02178 (recQ)
Enzymes [BR:
llz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LYB30171_02178 (recQ)
Messenger RNA biogenesis [BR:
llz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LYB30171_02178 (recQ)
DNA repair and recombination proteins [BR:
llz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LYB30171_02178 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
CAG4976439
LinkDB
All DBs
Position
1:2315239..2317056
Genome browser
AA seq
605 aa
AA seq
DB search
MENAALELLRTTFGHPGFRGEQAEIVACVAGGNDALVLMPTGGGKSLCYQLPALLRDGCG
IVVSPLIALMQDQVEALRQLGVRAACLNSSLDAGAAAEVERDLLAGDLDLLYVAPERLLT
GRFLHLLERAHASHGIALFAIDEAHCVSHWGHDFRPEYRQLTILHERWPDVPRIALTATA
DAPTRREIAERLALEDARRFVSSFDRPNIRYRVVQKDGKGSRALLDFIAGHKGESGIVYA
FSRKRVEKVAEQLQLAGIDALPYHAGMPNEQRAANQRRFLQADGVVMVATIAFGMGIDKP
DVRFVAHVDLPKSIEGYYQETGRAGRDGEPAEAWLSYGLGDVVNLRQLINQGEAGEERKQ
LEVRKLDALLGYCESTDCRRQALLGWFGEAHEGHCGNCDNCIDPPESWDGTEAARKALSC
VYRSGQRFGAGHLIDILRGVATDKVQRFGHGQLSTWGIGADLDVRQWSGVFRQLVAAGLL
EADVDRHNALRLTALATPVLRGERTLRFRKDAPRSTRRRERAGAAPMIELAPEAALRFDA
LREWRATTAREQNVPAYVIFHDATLRAIAAADPGDLDDLAGIAGIGGTKLERYGEAVLQQ
LFDVA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgccgcgctcgaactgctccgcaccaccttcggccaccccggtttccgcggc
gagcaggccgagatcgtcgcgtgcgtggccggcggcaacgacgcgctcgtgctgatgccc
accggcggcggcaagtccctgtgctaccagttgccggccctgctgcgcgacggctgcggg
atcgtcgtttcgccgttgatcgcgttgatgcaggaccaggtggaagcgctacgccagctc
ggcgtccgcgcggcgtgcctcaattccagcctcgacgccggtgccgcggccgaggtcgag
cgcgacctgctggccggcgacctcgacctgctgtacgtcgccccggagcggctcctgacc
gggcgcttcctgcacctgctcgagcgcgcgcatgccagccacggcatcgccctgttcgcg
atcgacgaggcgcactgcgtatcccattggggccacgacttccggcccgagtaccgccag
ctgacgatcctccacgagcgctggccggacgtgccgcggatcgcgctgaccgcgacggcc
gacgcccccacccgtcgcgagatcgccgaacggctcgcgctcgaggatgcccgccgtttc
gtcagctcgttcgaccggcccaacatccgctaccgggtggtccagaaggacggcaaaggc
agccgcgcgctgcttgatttcatcgcaggccacaagggcgagagcggcatcgtctacgcg
ttctcgcgcaagcgcgtcgagaaggtcgccgaacagctgcagctcgccggcatcgacgcc
ctgccctaccacgctggcatgcccaacgagcagcgcgcggccaaccagcgccgcttcctg
caggccgacggcgtggtgatggtggcgacgatcgcgttcggcatgggcatcgacaagccc
gacgtgcgctttgtcgcccacgtcgacctgcccaagtccatcgagggctactaccaggaa
accggacgcgccggccgcgacggcgagccagccgaggcctggctcagctatggcctgggc
gacgtggtcaacctgcgccagctgatcaaccagggcgaggccggcgaggagcgcaagcag
ctggaggtccgcaagctcgatgcactgcttggatattgcgaatccactgactgccggcgc
caggccctgctgggctggttcggcgaggcccacgagggccactgcggcaactgcgacaac
tgcatcgatccgcccgagagctgggacggcaccgaggccgcgcgcaaggcgctgagttgc
gtgtaccgcagcggccagaggttcggtgccggccacctgatcgacatcctgcgcggagtg
gccaccgacaaggtccagcgtttcggccatgggcagctgagtacctggggcatcggcgcg
gacctcgacgtgcggcagtggagcggcgtgttccggcaactggtcgcggccggcctgctg
gaagccgacgtcgatcgccacaacgcgctgcgcctgaccgcgctggccaccccggtgctg
cgtggcgagcgcaccctgcgcttccgcaaggacgcgccccgatccacgcgacgacgcgaa
cgcgccggcgccgcgccgatgatcgaactcgccccggaggccgcgctgcgcttcgacgcc
ctgcgcgagtggcgcgccaccaccgcgcgcgaacagaacgtgcccgcctacgtgatcttc
cacgacgccacgctgcgcgcgatcgccgcggccgacccgggggacctggacgacctggcc
ggcatcgccggcatcggcgggaccaagctcgagcgctacggcgaggccgtgctgcagcag
ctgttcgacgtcgcctga
DBGET
integrated database retrieval system
