Leishmania major: LMJF_05_0140
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Entry
LMJF_05_0140 CDS
T01014
Name
(RefSeq) putative nucleolar RNA helicase II
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lma03009
]
LMJF_05_0140
03036 Chromosome and associated proteins [BR:
lma03036
]
LMJF_05_0140
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMJF_05_0140
Ribosome biogenesis [BR:
lma03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMJF_05_0140
Chromosome and associated proteins [BR:
lma03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LMJF_05_0140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Cas3-like_C_2
ERCC3_RAD25_C
ResIII
DUF601
Motif
Other DBs
NCBI-GeneID:
5648875
NCBI-ProteinID:
XP_001687490
UniProt:
Q4QJI9
LinkDB
All DBs
Position
5:41920..43944
Genome browser
AA seq
674 aa
AA seq
DB search
MPRRAREEDGEEKPHRVTKLASSSADDEPVKASKISAKASDNDTGAAAEKRKRTEGSSKV
SATSATAPAEKKDEEVPNNGCAATARPFSEFEMNPIVVKALQSRGIESMFPVQALTFNAI
MRNTDVLVQARTGSGKTLAFGIPIVERLLKLPSHLTRGRGPAAVIFCPTRELAIQVQDVL
CGISCGLVVTALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDE
ADHMLDIGFKDDIELLLSQVAEQNGSVGAERPAHQTLLFSATVPEWVHTCSFIAKDKEFI
DMVGKEAVRTASTIKFYRRKCNFSEISSMLADLIKVYSGAHGRTLVFTNTKKDCHDLSIN
NTKLDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLPMVDLVIQCAPPSDI
DAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLPAPTREEILKAVARD
AAEDLARVERRATDLFMEQAAELLKDADPVEILASALAVMSGYTSNITARGLITGTPGYV
TVQMTSDRPLPVPVYCSILRNNLGDDTFMRCRDITLLQDDPGCVFDVLEQFAERVMSTPM
RGITFQRIEALPPIIARDLNSSRGGRGGFNYGGGRGGFNYGGGRGGFGGYGGNRGSGRGS
GRGGGRVGGFQRRY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgcgcgcgcgaggaggatggtgaggagaaaccgcaccgcgtcacgaagctc
gccagcagcagcgccgacgatgagccggtgaaggcgtcgaagatctccgccaaggcgtcg
gacaacgacaccggcgctgctgcagagaaaaggaagcgcacggaggggagctccaaggtt
tctgccacttcggcaacggcaccggcggagaagaaggacgaggaggtgccgaacaatggc
tgcgccgccacagcgcgcccgttctcggagtttgagatgaaccccatcgttgtcaaggcg
ctgcagtcacgcggcatcgagtccatgtttcctgtgcaggctctcaccttcaacgccatc
atgaggaacacggacgtcctcgtgcaggcccgcaccggcagcggcaagacactcgcgttc
ggtatcccgatcgtggagcggctgctgaagctgccgagccacctcacccgcggccgcggc
ccagctgccgtgatcttctgccctactcgcgagctagccatccaggtgcaggatgtgctc
tgcgggatcagctgcgggctcgtcgtgacggccctgtacggcggtgtcgcctacgcgaat
caggagcgcgtgctgcgcagcggcgtcgacattgtggtggccacccccggccgcgcgaag
gactttctagagaagggcacgctgcattttgaccgcgttgtgatggcgtgcctggacgag
gcggaccacatgctggacatcggcttcaaggacgacattgagttgctgctctcgcaggtg
gccgagcagaacggctctgtcggcgctgagaggccagctcatcagacgctgctgttctcc
gcgactgtgccggagtgggtgcacacgtgctccttcatcgccaaggacaaggagttcatc
gacatggtcggcaaggaggcggtgaggacagcgagcacgatcaagttctatcgcagaaaa
tgcaacttcagcgagatctcttctatgctcgctgatctcatcaaggtgtacagcggtgcc
cacggccgcaccctcgtcttcaccaacacgaagaaggactgccacgacctgtccatcaac
aacaccaaactggactcgcagtgcctgcacggtgatatgcagcaggagcagcgcgagagt
accatgaagagcttccgcgacaacaagttcagcgtcctcatcgccaccgacgtggcggcc
cgcggcctcgacttgcccatggtggacctggttatccagtgcgccccgccgagcgacatc
gacgctttcattcaccgagccggccgtacgggacgcgctggccgcaagggtgtgtgcgtg
ctgctctaccagccgcgcgaggagtacgttgtcgagcgcatcgagcgccacgcgaagatg
aagttcgacgtcctgcctgcccccacgcgtgaggagattctcaaggccgtcgcccgtgat
gccgctgaggacctggcgcgcgtcgagcgccgtgccaccgacctcttcatggagcaggcg
gccgagctgctaaaggacgcggacccagtcgaaatcctggcctcggcgctcgccgtcatg
agcggctacacgtcgaacatcaccgcgcgcggtctcattactggcacgccagggtatgtg
acggtgcagatgacgtcggatcgaccgctgcccgttccggtgtactgcagcatcctccga
aacaacctcggcgatgacacgttcatgcggtgccgcgacattacactgttgcaggacgac
ccgggctgcgtcttcgacgtgctggagcagtttgctgagcgtgtcatgagcacaccgatg
cgcggtatcaccttccagcggatcgaggcccttcctccgattatcgcgcgcgacctcaac
agcagccgcggtggtcgcggtggctttaactacggcggcggtcgcggcggctttaactac
ggcggtgggcgtggtggcttcggcggctacggtgggaatcgtggcagcggccgaggcagc
ggccgaggcggtggccgtgtgggcggtttccagcgccgctactga
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integrated database retrieval system
