Leishmania major: LMJF_13_0500
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Entry
LMJF_13_0500 CDS
T01014
Name
(RefSeq) putative RNA helicase
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_13_0500
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMJF_13_0500
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMJF_13_0500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_30
AAA_19
AAA_22
SWI2_SNF2
Cas3-like_C_2
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
5650079
NCBI-ProteinID:
XP_001681794
UniProt:
Q4QGA4
LinkDB
All DBs
Position
13:160993..166950
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AA seq
1985 aa
AA seq
DB search
MAQSSLAEDIFTGSVQTNSFVSECMQAQRPVALLTHSGEPLSPRGDRVGGSGRSAYQAQR
KIALDMLLSSVDDIVSQVYVNFDEDLTKVLLNALDRVTACDTLDQRERAKVRVIDELLEV
LGDKHYDLLQCVMYRPREVFLRLLEEFCTLEDAGDATTSQSSSGPKGLTVRFVKNNQRSQ
GQDVVINDAGKLTGQKWLAHMNRRYRVLMQESELDELFKRDFSVTGSIMPAGATVTKKAG
HVRIHIPPPRQEILPESKRVCVATSLPEWTHPAFLSITHLNTIQTTIFETAFHTSQNMLV
CAPTGAGKTVCGLLVMLRCISEHFEGGVLDRDFKIIFVAPMKALAQEMVENFSRRLAPFM
IKVRELTGDMQLTKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNEE
RGPVLEALVARTLRHGELNPEQRVRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRP
VPLEQTFIGLQNTSGAPKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTVGLAKYF
IEESTRRGEEHLFQYKGVMPSAIEKKGRTLQGRDLASLFAAGFGAHHAGLVRYDRTSTEG
FFRDGYLRVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRP
QFDTSGHGIIISDEKEVSHFLRLIAHALPIESQMQGKLCDHLNAEVNAGTISSVMEACSW
LEYTYMWQRIRVNPLTYGLKVNNVRKDPELKTVRYSMINTSFTDLAIAGMVRYNPETGSV
ESTDLGRLASHYYITYESISIFNEKMRRPDDTWIDALDMGTAMNIAASAKEFSQLKVRQE
ELDELQNLHQLLPKQVREYRASGESADETSTQWKVTTLLKAYINRLSVETHSLSSDMVYV
LQNMPRICRALFEIELERGHPLTTYTYLTLCKCIEHRCWDFEHPLMQFANWSHRVNITDA
VWMNLNKCNPSMQLLQELTAKEVGEMVHNVRAGRDIADLVSKFPSVNIDIDVQPITRSIL
RVKVTIEADFVWSRDLSGNSEVFWLLVEDQDNHFIFHHESVMLTRKEVETGTPHVVNLAV
PIVPQYDMYAVRLYSDRWMGCKEDYTFSIGHLHLPEDSQMTTKLLPLSPLRLHVIPEEYH
AMYRNYRQFNAVQTQIFYTMFHTDQNVFLGAPTGSGKTIAAEMAILRVFEQYPGKKVVYI
APLKALVKERLRDWKARMMLVGRSVVELSGDATPDISALAKADILCTTPEKWDGISRNWQ
VRSYVTAVKLVVFDEVHMLGTDRGPILEVIVSRMRYIGWNRKAPIRLVGLSTAVSNPGDL
SSWLGVEKKWAVFNFDPSVRPVPMTVHIAGYHGKNYCPRMATMNKPTYNAICEKSPTQPV
IVFVSSRRQTRLTAMALIGFLLMEGNTAKWVHMDVDQVQKYTSKLDDPYVKHCLQFGVGI
HHAGLLEGDRTIVEEAFLSNRIQVLVATSTLAWGVNFPAHMVVVKGTEYYDAKTNSYVDF
PITDVLQMIGRAGRPQFDTEGVAQVLCHEPKKGFYRKFLYDPFPVESALHKQLHVHINAE
IVSGTINTRQDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGALADLERC
GCIEQPDTMDEDADPDAIQYTVLGKLCSYYYISHITVDLFNRNIEPDHSSGELLRLLCDA
EEFNELPVRHNEDKLNMELARQLPLPVRDAEADSPHVKAFLLFQALFERAPMPITDYITD
QKSAMDNAVRVIQAMVDVAANNGHLYAALRCMTLMQCMVQARWWDDNSLLQIPNVVKAML
PVIEKECDGVRHAAELANCPLAVLQKFRKVLEMPVFGLRERDVNESMEAVRGLPLIQVDL
TIQQQQPAAAEETDAEDEEAVVTYELVVHLQRLSFGQKRVIAPHFSKAKDEQYWVVVGHE
PTGELVALKRVNRLRQSSTATLRIDWDEDWVQYSPDGTVELNVYLVCDSYIGMDQQYSFI
LPRSN
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagcagcttggcagaggatatctttactggtagcgtgcagacgaacagcttc
gtgtccgagtgcatgcaggcgcagaggcccgtggcgctgctcacccactctggcgagccg
ctgtcaccgcgcggcgatcgcgtcggtggatctggccgctcggcgtaccaggcgcaacgc
aagattgcgttggatatgctactctccagcgttgacgatatcgtgtcacaggtatacgtg
aactttgacgaggatctcaccaaggtgctgctcaacgcactcgatcgcgtcacggcctgc
gacacactggatcagagggagcgagcgaaggtgcgcgtgatcgacgagctgcttgaggtg
ctcggggacaagcattacgacctgctgcagtgcgtcatgtaccgccctcgcgaggtcttc
ctccggctcctggaggagttctgcaccttggaggatgccggggatgccacgacgagccag
tcctctagcggcccgaagggactgacggtgcgcttcgtgaagaacaatcagcgttcgcag
gggcaggatgtggtgatcaacgacgcgggcaagctcaccggccagaagtggcttgcccac
atgaacaggcgttaccgtgtcttgatgcaggagtccgagctggatgagctctttaagcgg
gacttcagcgtgaccgggtccattatgccggcaggcgccactgtcaccaaaaaggccggg
cacgtgcgcatccacatcccccctccaaggcaggagatcctgcctgagagcaagcgcgtc
tgtgttgcgacgtctctgccagagtggacacacccagcctttctctccatcacgcacctc
aacacgattcagacaacgatcttcgagacagcgtttcacacatcgcagaacatgctggtg
tgcgcgccgacgggtgcgggtaagacggtgtgtgggctgcttgtgatgttgcggtgcatc
agcgagcactttgagggcggtgtgctggatcgagacttcaagatcatcttcgtggcccca
atgaaggcgctcgcgcaggagatggttgagaacttctcgcgccgcctggcaccgttcatg
ataaaggtgcgcgagcttacaggcgacatgcagttgaccaagcgggagctggcggagacg
caggtgatcgtgacaacgccggagaagtgggacgtcatcacccgcaagcagagcaacgag
gagctggtaagccaagtgcggctcatcatcatggatgagattcatctcctgaacgaagag
cgcggcccggtgctagaggcgttggtcgcgcgcacactgcggcacggcgagctgaatccg
gagcagcgcgtccgcctggtgggtctctccgccacgctgcccaactacaaggacgtggcg
aactttctgcaggcggacttgcgggagggtctgaaggtgttcggcccggagtatcgacct
gtcccgctggagcagacatttattggtctgcaaaacacatccggggcgccgaagcgcaac
aaggagttcgagctcgatcgcctggcgtatgaggaggtggtgaagaacgtgcgggagggg
caccaggtaatggtgtttgtgcactcgcggaagcagacggtggggctggccaagtacttt
atcgaggagtcgacgcgccgtggggaggagcacctgtttcagtacaaaggtgtcatgccc
tcagcgatcgagaagaagggccgcacgctccagggacgcgacttggcctcgttattcgcc
gccggctttggcgcgcaccacgccggcctcgttcgctacgaccgcaccagtacagaaggc
ttcttcagggacgggtacttgcgagtgctgtgctgcacgagtaccctggcgtggggtgtg
aacctgcctgcgcacacggtggtcattcgcggcacgcaaatgtacgaccccaagcgcggt
ggcctcgtctcgatttcggtgctggatgtgatgcaaatcttcggccgcgctggtcgtccg
cagttcgacacgagcggacatggcatcatcatctcagatgagaaggaggtgagccacttc
ctccggctcatcgcacacgccctgcctatcgagagtcagatgcaaggtaagctgtgcgac
cacctgaacgccgaggtgaacgccggcacgatatcctccgtgatggaggcctgctcgtgg
ctggagtacacgtacatgtggcagcggattcgggtgaatccgctgacgtacgggctgaag
gtgaacaatgttcgcaaagacccagagctcaagacagtgcggtacagtatgatcaacact
tcgttcactgacctcgccattgcgggcatggtgcgctacaacccggagacgggctcggtg
gagagcaccgatctcggccgtctcgcgagccactactacatcacctacgagagcatcagt
atattcaacgagaagatgcgccgccccgatgacacgtggatcgacgcgttggacatgggc
accgctatgaacatcgccgcctcggcaaaggagttcagccagctgaaagtgcggcaggag
gagctggatgagctgcagaacctgcaccagctgctgccgaagcaagtgcgtgagtatcgg
gcgagtggcgagagcgccgacgagacgagcacgcagtggaaggtgacgacattgctcaag
gcgtacatcaaccgcctttctgttgagacgcattctctgtcgtccgacatggtgtacgtg
ctgcagaacatgccccgcatctgccgcgccctcttcgagattgagctggagcgtggccac
cccctcaccacgtacacgtacttgacgctgtgcaagtgtattgagcaccgctgctgggac
tttgagcacccgctgatgcagttcgcgaattggagccaccgggtgaacatcacagacgcg
gtgtggatgaacctgaacaagtgcaacccgagcatgcagctgctgcaagagctgacggcg
aaggaggtgggagagatggtgcacaacgttcgcgccggtcgcgacattgccgatctggtg
tcgaagtttccctcggtgaacattgacattgatgtgcagcccatcacccgctccatcctg
cgcgtcaaggtgacgattgaggcggattttgtgtggagtcgcgacttatccggcaactcc
gaggtgttctggctgctggtggaggaccaggacaaccacttcatcttccaccacgagtcg
gtcatgctcacgcgcaaggaggtggagaccggcacgccgcacgtggtgaatcttgctgtt
ccgattgtgccccagtacgacatgtacgcggtgcgcctctacagtgaccgctggatgggc
tgcaaggaggactacaccttctccattggccacctgcaccttccggaggactcgcagatg
acgacgaagctgctgccgctgagcccgcttcggctgcacgtgatcccggaggagtaccat
gccatgtaccgcaactaccgccagttcaacgcggtgcagacgcaaattttctacaccatg
tttcacacagaccagaacgtcttccttggtgcgccgacgggcagcggtaagacgattgcg
gcagagatggccatcctccgcgtgtttgagcagtatcccgggaagaaggtggtgtacatt
gcgccgctcaaggccctcgtgaaggagcggctgcgtgactggaaggcccgcatgatgctt
gtggggcgctctgtggtggagctgtcgggtgatgcgacgccggacattagcgcgctcgcc
aaggcggacatcttgtgcacgactccggagaagtgggatggcatttcgcgtaactggcag
gtgcgcagctacgtcacggccgtgaagctggttgtgtttgatgaggtgcacatgctgggc
accgaccgtggtccgattctggaggtgattgtgagccgcatgcgctacatcggttggaac
cggaaggcgccgatccgcttggtaggtctctccacggccgtctcgaacccgggcgacctg
agctcgtggcttggtgtggagaagaagtgggccgtgttcaactttgacccgtccgtgcgt
ccggtgccgatgacggtgcacattgcgggctaccacggcaagaactactgcccccgcatg
gccaccatgaacaagccgacgtacaacgccatttgcgagaagagcccgacgcagccggtg
attgtgttcgtctcgtcgcggcggcagacgcgactcacggccatggccctcatcggcttc
ctgctgatggagggcaacacggccaagtgggtgcacatggatgtggatcaggtgcagaag
tacacctcaaagctggatgacccgtacgtgaagcactgcctgcagttcggcgtcggcatc
caccacgccgggttgctggagggcgaccgcacgattgtggaggaggccttcctgtcaaat
cgcattcaggtgctggtcgcgacgtcgacgttggcgtggggtgtcaacttccctgcgcac
atggttgtggtgaagggcaccgaatactacgacgccaagacgaactcctacgtggacttc
ccgatcacggatgtgctgcagatgatcggccgtgcggggcgtccgcagtttgacacggag
ggcgtggcccaggtgctgtgccacgagccgaagaagggcttctaccgcaagttcctctac
gaccctttcccggtggagagcgcgctgcacaagcagctgcacgtccacatcaatgctgaa
attgtgtcggggacgatcaacactcgtcaagatgcagtcaactacctgacgtggacctac
ctcttccgccgaattgcacgcaacccctcctactacgggctggaggacggctctcccaag
gcggtcacaatcttcctctccactctggtgaagggcgcgctggcggaccttgagcggtgc
ggctgtattgaacagccggatacaatggacgaggacgccgacccggatgcgattcagtac
accgttctcggcaagctgtgttcgtactactacatctcccacatcacggtggacttgttc
aaccgcaacatcgagccggatcactccagcggcgagcttctgcgtctcctgtgcgacgcg
gaggagttcaatgagttgccggtgcgtcacaacgaagacaagctaaacatggaactggcg
cgccagctgccgctgcccgtccgcgacgcagaggcggacagtccgcacgtcaaggcgttc
ctcctcttccaggcgctctttgagcgtgcgccgatgcctatcacagactacattacagat
cagaagtccgctatggacaacgcagtgcgtgtgattcaggccatggtggacgtggccgcc
aacaacggccacctgtacgccgcgctgcgttgcatgacgctcatgcagtgcatggtgcag
gcccgctggtgggacgataactctctgctgcagatcccgaatgtagtcaaggcgatgctt
ccggtcattgaaaaggagtgcgacggggtgcgtcacgcggcggagctggcgaactgcccg
ttggcagtgctgcagaagttccggaaggtgctcgagatgcccgtgttcgggctgcgagag
cgggatgtgaacgagtcgatggaggcggtgcgcgggctgccgctcatccaggtcgacctc
accattcagcagcagcagcctgctgcagcggaggagacggatgcggaagacgaggaggcc
gtcgtgacgtacgagctggtggtgcatctgcagcggctttccttcggacagaagcgcgtc
attgcgccgcacttctcgaaggccaaggatgagcagtactgggtagtcgtcggccacgag
cctacaggcgagcttgttgctttaaagcgtgtgaatcggctgcgacagagcagcacggcg
acgctgcggatcgactgggacgaggactgggtgcagtacagccccgacggcaccgtggag
ctgaatgtgtatctcgtgtgtgactcgtatatcggcatggatcagcagtacagcttcatc
cttcctcgttcgaactga
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