Leishmania major: LMJF_18_1070
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Entry
LMJF_18_1070 CDS
T01014
Name
(RefSeq) putative vacuolar protein sorting complex subunit
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lma
Leishmania major
Pathway
lma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LMJF_18_1070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lma04131
]
LMJF_18_1070
Membrane trafficking [BR:
lma04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LMJF_18_1070
Hops complex
LMJF_18_1070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
5651035
NCBI-ProteinID:
XP_001682513
UniProt:
Q4QDT5
LinkDB
All DBs
Position
18:453209..455698
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AA seq
829 aa
AA seq
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MTWNKAADHLIVVLNTGFVHFYNYCGATAATSLPMEIPVVCTSCDNGFVALVDTATEAKL
VLVHLGPQKEYSVRELSLPQSIRQFMRTIALVALDESADKRHTTEVFLSYSPWSSNSFIC
RCIFGASNSSFLELDVPVEGGRVLEMCRSPTGRAVAFMMLDGSVYSTNSGFSEVSLLRRT
DTTPESFVQMTWCGNHCVAYLQRMQYGSASGEGECEEYSCSLFLMNVDEPDNSDCISDLP
FDGCLLPEKDGVWVLSRESLYFLQIAPLAVQRVFSVGSRAAGAMLVATYDEFMTGDASAV
RMLRNLEHTSGALVEAVADCVAAAGFEFDAAQQKRLLRIAAFGRTFCSLCDSSSFMAMSK
RLRVRNHLRLEPLGMIVTDQELADLGEVRLLQRLTMCSEHQLAFCVAEALGSDLKPVMLD
WAMCRLARVSVHSKDEEREVAKQIVKKLKACRFTAFAELAQQAKVAGRGAAAVVLLDAEV
NPSQQVPMLLSIGEPDMALKRAIQAANADLVFTVMVHMIRSRGSAALATLTSHKISCDLL
LQYVGVCEGNQQLMAEYFNKHPRVQAYFHLRSYFREETRLGHALSQSMESGNWEMLQECK
GVDIQAAIVSTKKAVEQSPRPQSTTTAVSPIVGGGIAFPASMIDERFLQLQSSLLDEQTQ
LMNEYKDYRFLQASAADTIRYALEHGRTSVAQRLKNAFCVPEKMFQRCMLSAYLCTSQWD
LIDDMSGISSNKKTLLDGEAFVTALLSYKRPQQAKQYISRIPKIETRMEYYVLCSDWFGA
GADCKRSNDPDLLAQLKDRAKGNPDALRQIEEGWNTLPHTSGISFPKFF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgacatggaacaaggcagctgatcacctgatagtagttttgaatacagggttcgtccac
ttttacaactattgcggtgcaacggcagcgacatctttgccgatggaaataccggttgtc
tgtacatcttgcgacaacgggtttgttgcactggttgacaccgcaactgaagcgaagctt
gtacttgtgcaccttgggccacaaaaggagtactcagtgcgggagctctctttgccgcag
agcattcgccagttcatgaggacaatcgcactcgtcgcccttgacgaaagcgctgacaaa
agacacacaacagaggtgtttctttcgtattcaccgtggtcctcgaactcattcatttgt
cggtgcattttcggcgcctcgaactcgtctttcttagagctcgatgtgccagtcgaggga
gggcgcgttctggagatgtgccgctcgcccaccggccgcgccgtcgcgtttatgatgcta
gatgggtcggtatactcgacgaatagcggattctctgaggtttctctgcttaggcgtact
gacacgactccggaaagttttgtgcagatgacgtggtgtggaaaccattgtgttgcatat
ctacaacgaatgcagtacggcagcgcgtcgggtgagggtgaatgtgaggaatactcctgc
tcactattcttgatgaacgtcgacgaacctgacaacagtgactgcatctctgacttaccg
tttgatggttgtcttcttcctgagaaggacggtgtttgggtgctctctagagagtcgtta
tatttcttacagattgccccgcttgccgtccagcgcgttttttctgtcggttcgcgggcc
gctggggcgatgcttgtggcaacttacgatgagtttatgaccggagatgcgtctgccgtg
cgaatgctacggaatcttgagcacacctcaggcgcgctggtggaagcggtcgctgactgc
gttgctgcagcgggcttcgagtttgacgcggcgcaacagaagcggctgttgagaatcgcc
gcatttggccgaacgttttgttccctctgtgattcaagctcattcatggccatgtcgaag
cgactgcgtgtgcgcaatcatcttcgtctcgagccgctgggcatgatagtgactgaccag
gagctcgccgacctcggcgaggtgcgccttctacagcgtcttacaatgtgtagtgaacat
cagctagccttttgtgtggcagaagctcttgggtcagatttgaagccagtgatgctggac
tgggcgatgtgcaggctggcgcgtgtctctgttcacagcaaggatgaggagcgggaggtc
gcgaagcaaatagtcaagaagctgaaggcgtgtagattcactgcattcgcagagttggca
cagcaggctaaggtcgccggccgcggcgccgccgcggtggtactgctggatgcagaggtg
aatccgtctcagcaagtgccgatgctgctcagcataggcgagcctgacatggccttgaag
cgcgccattcaagccgctaacgcagatctggtgttcactgtcatggttcacatgatccgc
agccgcggctccgctgcgcttgccaccttgacatcgcacaaaatttcgtgcgatctgctg
ctgcaatacgtgggggtgtgcgaaggcaatcagcagctcatggcggagtacttcaacaaa
cacccacgggttcaggcctacttccatctgcgcagctactttcgcgaggaaacacgactg
ggacacgcgctgtcgcagtcgatggaaagcggaaattgggaaatgctacaagaatgcaaa
ggcgtggacatccaggctgctattgtctcgaccaaaaaggctgtagagcagagcccacgc
ccgcagtcgaccaccacggccgtttctccgatcgtcggtggcgggattgcgttcccagct
tccatgatcgatgagcgctttttgcagctgcagagcagcctcctcgacgagcagactcag
cttatgaacgagtacaaggactaccgcttcctgcaggccagcgccgccgacacgatccgc
tacgccctcgagcatggacgcacttctgtcgcgcagcggctgaagaatgcgttttgtgta
ccagagaagatgttccagcggtgcatgctcagtgcctacttgtgcactagtcagtgggac
ctcattgacgacatgagcggcatctcgtccaacaagaagacgctgctggacggcgaggct
tttgtcaccgccttgctctcctacaagcgcccgcagcaggcaaaacagtatatttcgcgt
attccaaagatcgagacgcggatggaatactacgtgctctgcagcgactggttcggtgca
ggtgccgactgcaagcggagcaacgaccccgatttgctagcgcagctgaaggaccgcgcc
aaagggaatccagatgcactgcgtcagatcgaagagggctggaacacactgccccacacg
tcaggcatcagctttcccaagttcttttag
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