Leishmania major: LMJF_20_0010
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Entry
LMJF_20_0010 CDS
T01014
Name
(RefSeq) putative DNA-directed RNA polymerase polypeptide
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lma
Leishmania major
Pathway
lma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMJF_20_0010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lma03021
]
LMJF_20_0010
Enzymes [BR:
lma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMJF_20_0010
Transcription machinery [BR:
lma03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LMJF_20_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
5651531
NCBI-ProteinID:
XP_001682755
UniProt:
Q4QD43
LinkDB
All DBs
Position
20:complement(2300..5698)
Genome browser
AA seq
1132 aa
AA seq
DB search
MVTGAHAMSDFGDEYQRKKLEMLPALMGMRGILNHHIASFDHLIEVELQRILLNESNVEI
KSTVDPDFVIRYQNIRICRPQEIVGKGHIPKLVTPQECRIRDMTYRGDMIVDVQYTSRDR
SRAMLVEKDVKIGTIPIMLKSKCCNLYRKTREELVNMRECPLDPGGYFIIKGVEKVCLVQ
EQQSKNRVIIEADEHGNISAHVQSKTHYSISKCAVTFKKGSIVLTHRSFTEDIPIIVVLK
ALGLENDQHITQCIGTLPEFQKILFPCFEEARLLNVVTQNDALQYIGEKRKETVWEAEET
QQRQVNRSKADKAAEFLANVLLCHIREAQVQKDWNFRHKAFYVCFMVRGMIEASFDTSLL
DERDFYGNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSRKDSTRPFNVKQLMESKM
EVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVSGP
RSLQPSQWGMVCPCDTPEGESCGLVKNFATLSQVTLDLNDNYVRAAAHALGVEEIDTVTP
TDFLHYCTVFLNGTLIGIHRYPNRLCAGIRTLRRSGRLHPHVSISTQPRQRTVQIGSDGG
RIVRLLIIVRDGKPAVTSAHLDRLRDRLCTHNDFLAEGLTEYVDVNESNDCLIAVYPADI
GPYTTHLEVEPLSLLGVVAGIIPYPHHNQSARNTFQSAMGKQALGTVALNQYIRADTVLL
LGAYPQRPLCRTKAMSLTHYEKLGAGINAMVCVMSYSGYDIEDAQVYNKSSLDRGYGRCV
VLRKHEVDLEKYAGGEFDVILPPEKNSGTGKFKALNPDGVAGKGALVQQYDVLVNKFTPV
AGGDPRPAPLVYKYPQPAVVDHVIISPPGDYDRSLDVDQKIKVVTREVRPPEPGDKFSSR
HGQKGVVGLIVNGVDMPFNERGMCPDMIMNPHGFPSRMTVGKLLELVCSKAAALRGSMGD
GTAFGGESADSISQQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHMVTDKM
HARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMFTADIC
HVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSPT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggtcacaggtgcgcacgccatgtccgactttggtgacgagtaccagcggaagaagctt
gagatgcttcctgcgctcatgggcatgcggggcattctcaaccaccacatcgcctccttt
gaccacttgatcgaggtggagcttcagcgaattctgctaaacgagtccaatgtcgaaatc
aagagcaccgtcgacccggactttgtcattcgttaccagaacattcgcatctgccggcca
caggagattgtaggcaaaggtcacataccaaagcttgtgacgccgcaggagtgccgtatt
cgcgacatgacgtaccgaggcgacatgatcgtagatgtccagtacaccagccgcgaccgc
tcgcgagcgatgctggtcgagaaagacgtcaaaatcgggactatacctattatgctcaag
tccaagtgctgcaacctgtaccgcaaaacacgcgaagagctggtgaacatgcgggagtgc
ccactcgaccctggtggctacttcattatcaaaggcgttgaaaaggtgtgcctggttcag
gagcagcaaagcaagaaccgtgtcatcattgaggctgacgagcacggcaacatctcggcc
cacgtgcagagcaagacgcactactccatctccaagtgcgccgttaccttcaagaagggc
agcatcgtgctcacgcatcgctccttcacagaggacatcccgatcattgtcgtgttaaag
gcgcttggcttggagaatgatcagcacatcacccagtgcatcggcaccttgccagagttt
cagaagatcctttttccgtgcttcgaggaggcgcgtctgctgaacgtggtcacgcaaaac
gacgccctgcagtacatcggtgagaagcggaaggagacggtgtgggaggcggaggagacg
cagcagcgacaagtcaacaggtcgaaggctgacaaggcggccgagttcctcgccaacgtg
ctactctgccacatccgggaggcgcaggtgcagaaggactggaactttcgccacaaggcc
ttctacgtctgcttcatggtacgtggcatgatcgaggccagcttcgacacatcgctgctt
gacgagcgcgacttctacggcaacaagcgattcgagacaaccggaacgctgatggccctc
ttgtttgaggacttgctgaagcaattcaaccgcgttgtgaagacggcgatggatcagcag
ctgtccagaaaggactccacacgcccgttcaacgtgaagcagctgatggagagcaagatg
gaggtgatccagaatggcatgcgcatggcgatcagcagtgggcgatgggacttgaagcgc
ttcaacatgaaccggcagggcatcacacaggtgctctcgaggctctcgtacattgccagc
ctcggcatgatgacgcggctggcgtcctcgttcgagaagacgcgcaaggtaagtggccca
cgctcgctgcagccgagtcagtgggggatggtgtgcccctgcgatacaccagagggcgag
agttgcggtctagtgaagaactttgcgacgctcagccaggtcaccttggacctcaacgac
aactacgtccgtgccgccgcgcacgcacttggtgtggaggagatcgacaccgttacgccg
acggactttctacactactgcaccgttttcctcaacggcaccctcattggcattcaccgc
taccccaaccgactgtgcgccggcattcgcactcttcggcgctccggtcgtcttcacccg
cacgtgtccatctcaacgcagccacggcagcgcacagtccagatcggcagtgatggcggt
cgcatcgttcgcctgctcatcatcgtgcgcgacggaaagccggccgtcacctctgcccac
ctcgaccgcctgcgcgaccggctgtgcacccacaacgactttctggcggaggggctgaca
gagtacgtggacgtgaacgaatcgaatgactgcctcatcgccgtctaccctgccgacatc
gggccctacaccacccacctcgaggtggagccgctgtcgctactgggcgtcgtggccggc
attataccttatccgcaccacaaccagtccgcccgcaacaccttccagtccgcgatgggc
aagcaggccctcggcactgtggcgctcaaccaatacatacgcgccgacacggtgctcctc
ctcggtgcctacccacagcggcctctgtgccgcacaaaggccatgtcgctgacacactac
gaaaagctcggcgccggcatcaacgccatggtgtgcgtcatgagctacagcggctacgat
atcgaggatgcgcaggtatacaacaagtcctccctggatcgcgggtacggccgctgcgtg
gtgctgcgcaagcacgaggtggacttggaaaagtacgcgggcggcgagttcgatgtcatc
ttgcccccggagaagaatagcggcaccggcaagttcaaggcgctcaacccagacggcgtt
gctggcaaaggtgcgcttgtgcagcagtacgacgtcctcgtgaacaagttcaccccggtc
gctggcggcgacccgcggccggcgccgctggtgtacaagtatccgcaacctgcggtcgtt
gaccatgttatcatctcgccccctggcgactacgacaggtcgctcgacgtcgatcagaaa
atcaaggtggttacgcgggaggtgcgaccacccgaacccggtgacaagttctcatcacgt
cacggacagaagggcgtcgtcggcctgattgtgaatggagtcgatatgcccttcaacgag
cgcggcatgtgtcccgatatgatcatgaacccgcacggcttccccagccgcatgacggtc
ggcaagttgctcgagctcgtttgctcaaaggcggcagcgctccgagggtcgatgggcgac
ggcacagccttcggcggcgaatcggcagacagcatcagccagcagctcctctcctttggc
tacaactaccacggcaaggatgtcttttattcgggcatcacgggcgagttaatgcagggc
tacgttttctttgggcccatttactaccagcgccttaagcacatggtcacagacaagatg
cacgcccgctcgaccgggccacggtcgatgctcactcgccagccaaccgagggtcggtct
cgcagtggtggtctccgcgttggtgaaatggagcgcgactgcatggttggctacggtgcg
tccaacctcctcaacgagcgacttctcatcagctccgacatgttcacggcggacatttgc
cacgtgtgcggtaacctcggctacaacaatcgctgtacgtactgcaaaaccaaggggact
acctccaaggtgaacatgccctacgccttcaagctacttatccaagagctacagggcatg
ggggtcagccttcgcctcacgatggactccccgacatag
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