Leishmania major: LMJF_23_1380
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Entry
LMJF_23_1380 CDS
T01014
Name
(RefSeq) putative DNA polymerase theta
Organism
lma
Leishmania major
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Ortholog
Paralog
GFIT
Motif
Pfam:
POLQ_helical
DEAD
Helicase_C
HTH_61
ResIII
HHH_5
DUF7898
Helicase_dom4_arc
Motif
Other DBs
NCBI-GeneID:
5652133
NCBI-ProteinID:
XP_001683484
UniProt:
Q4QB14
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All DBs
Position
23:663774..669419
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AA seq
1881 aa
AA seq
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MTAPTITSPSTQSGKWFLSALEHEQRDYATAISPAPPSLQSPSLLPPYRSPCHSGASEQV
LPVPPAAPSTPKAAPSTPPSLPLPLLPCDSTSPLPPVPQLRVHDLAALPLSSLSREASLL
PSSSRRGLSVPLSSLRLECAESPLSPLLADSSPALAIDLMREQAGALVTAAAAGGERQTL
SSLASPDRSVGELARVQQQQQQASTRPSSALTAAEEAEREECDEALEYEMAEDLRMSMDI
AFTPSGTGSCAPPLFSQSSMMQEERQAEEEGGSEGATCIMRGSAVAVERAGDNSELRSSP
AMSGQEGSAQPFFRFQDGAGDVLISGSTPPPSIAIPAVLNEHALISGGTATADSSAAPPT
SSLAVLPSAFAGLPSAPSTWPIREATPPHLPSELVPGTELLPLGVAVAADGGGGPSVGRM
GPGRHRTVFSFSSLRVGTASAAALPDPFPEPQPRLCQLSVATTTGQASAGSARNVAASVA
EPATPVSSPPSEACATTHPPDLWLPSLPTEHVSPPCDPLLMRVSSQGGKAEGCAAQSVFR
MGVVAPTPTSLGSDVLSSATGVSALSAANAAPPLSDLHVTALPYLATAAAGGSGAPAVPA
RPGRTCFTLHSAARTTGTLSSSAAATSTEEPTTAAASASTGAVPPALTEASYLSAEKCFF
RGGTAELQQLPGHGAASPQGTEGLMVSLDGVASATPSDTRKMPSSMESRHTTGCAQPVIA
NAQPALLRPVDSTPSTVVMHRTPSTLTSEEPAWNRRSAPFPQPWPSLSDGQPPALLTVAA
VTPLVGCMGAEAPTVAAPQSAQAPAAHDETTQPYLRESREMVSYVPLAPPPPSPPLLRPA
GTDDTAELFYGLPREVGHFYATRRGVTSLYDWQHDVLTRPEVRQGGNFVYSLPTSGGKTL
VAELSLLRCVLNRRKSCFLVLPFVSLAEEKTMALQPLTTAYDFNVDGHYGSSGRFPLSGA
PAVYVCTIEKANSLLNHMLEEGRTDEIGAVVVDELHMVGESGRGATLELFLSKVLVINAA
RQRKRDAVVAPATQSRCSASGLRPGWPEELEDAEEDLHERAVMTDTAKAASDPGSLQIIG
MSATVPNLRTLAEWLRAAYFEYDFRPVPLHAYSVVGGLVLRDGQHNERNLSSDSVTQHLV
ELATEVPDASVLIFCASRQQCVDTAKGIVNYLKAQAIAGQKVPSPWMSGSSDAAAEAQHV
SVLGVPFPSLTRGPVTAAAMAAVPPQASAAIKGLLADLEALAHHEASQLSEVIAFGVAFH
HGGLLAEERDLIETAFRRKHIRILCCTSTLAAGVNLPARRVIIKTPYVGREFLTKSRYLQ
MCGRAGRAGLDPYGESFLLLSSRDQARGHALMHAAVEPCSSKLLEDDQALTRSLLECVGV
GLVADFQSACEWSGSLLSRWAVGPVDASWQPHIAAAAAPAVPASTGVAPPGAAANGTRES
VTGLFLASGVGYDGDATAAQDSESSRSAPGPSASPPSHPASPASPPLTCVPPTAMKAMVR
ASLVTLARCGFIRVACTRVGSGGSNGAITVNNTDTISTFTGTGAGTGGGDCAAAGTTVGK
DNGTASSASPETLPSSISDDAHADASAETQDACHAQVLVTSFGSSSVRSCFSVEEALLLR
AELDELRHTGLILSDDLHLCYFLTPLREVGKCDWELLRLMMSRMSDSRQRIASLLGVDAY
FVDQQAMGLGGPLQATEEGRRRLFTARRFYVALMLADVLAEVPMATVEQRYNVSRGQLQN
LMRSASMFSSSITSFCHAMEWFSLEAVLSSFVKRLGFGVKPDLLPLMEIRGMQPPRARAL
WSAGFKKLAAIAAADADDMVSKVKSMNPKDSKAAKFFTKRSALMAIREANLALQSQIKEK
KGELQELTVCCGGGGGVRGAR
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccgacgataacgtcaccatcaacgcaatcgggaaagtggtttctttcggca
ctggagcacgagcagcgcgactacgccacagcgatctcccctgctcctccctcgctacag
tcaccgtcgctgctgccgccgtaccgatcgccgtgccacagcggcgcatcggagcaggtc
ttgccggtgccgcctgccgcgccgagcacaccaaaggccgcgccatctactcctccatca
ctacccctgccgctgctgccctgcgactccacatctccattgcccccggtgccgcagctc
cgcgtgcatgacttggcagcactgccattatcttcgctcagtcgcgaggcctcgctgctc
ccaagcagctcacgccgtgggctctccgtgccgctctcttcgctgcgccttgagtgcgcc
gaatcgccactatcgccgctgttggcggacagttctccggcgctcgccatcgacttgatg
cgagagcaggcgggggctcttgtcactgctgcagctgcgggaggcgaacgccagacgttg
tcatctctggcatctccggaccgctcggtgggagagctggcgcgcgttcagcagcagcag
cagcaggcgtcgacgcgcccctctagcgcactcactgctgcagaggaggccgaaagagag
gaatgtgacgaggcactcgagtacgagatggcagaggatctgcgcatgtcgatggacatt
gctttcacgccgtctggcaccggcagctgcgcgccgcccctcttctcgcagtcatccatg
atgcaagaggagaggcaagcggaggaggaaggcggcagcgagggggcgacctgcatcatg
agaggcagcgccgtggcggtggagcgagctggtgacaatagtgagttgcgctctagccca
gcgatgagcggtcaggagggcagcgcacaaccattcttccgcttccaagatggcgcaggt
gatgtgctcatctctggatcaacgccgcctccttccattgcgattccagctgtgctcaac
gaacacgcgttgatcagcggcggcaccgctacagccgattcgagtgccgcgcctccaacg
agctcgttggcagtgctgcccagcgcctttgccggcctgccgtctgcaccgtcgacgtgg
ccgatccgtgaggctacgccgccacatcttccatcggagctcgtgcctggtacagagctg
ttgccgctcggcgttgcggtcgctgctgatggaggtggaggcccgagtgttgggaggatg
ggccctggacgtcatcgcaccgtgttttcgttcagctcgctgcgcgttggcaccgcaagc
gccgcagcgctacccgatcccttccctgagccgcagccacgtctgtgccaactatcagtg
gcgacgacaacaggtcaggcaagtgctggaagcgctcggaatgtggctgcttctgtggct
gagcctgctactcccgtcagctcgccgccctcagaagcctgtgctacaacgcacccacct
gatctgtggctgccgtcgttgccgaccgagcacgtgagccctccgtgtgatcctctgctg
atgcgggtttccagtcaaggtggaaaggccgagggttgcgctgctcagagtgtttttcga
atgggcgttgtggcaccgacgccgacgtcgctggggagcgacgtgctttcctctgcgacc
ggcgtctccgcgctgtcggctgcgaacgcagcgcctccgctctccgacttgcacgtcacc
gcgctgccgtaccttgccacggccgctgccggtggcagcggcgcacctgctgttcccgca
cgcccaggccgcacgtgctttacgctgcactccgctgcgcgaacgacagggacactttct
tcctctgcagccgccacatcaacagaggagccgacgacagcggcggcgtctgcgtcgacc
ggcgcggtgccaccggcattgacagaggcgagctatctctcagccgagaagtgtttcttc
aggggcggcacagccgagctgcagcagctgccgggacatggtgctgcgtcaccgcaggga
acagagggactgatggtgtctttggatggtgtcgcgtcagcgacaccaagcgatacaagg
aaaatgcccagcagtatggagagccgccatacgaccgggtgtgctcagccggtcattgcc
aacgcgcagccggcgttgctgcggcccgtcgactcaacaccttcgacggtggtcatgcac
cgcacaccgtcgactctcacaagtgaggagccagcgtggaatcgacgaagcgcgccgttc
ccgcagccgtggccgtcgttgagcgatggccaaccgccggccttgctcacagttgctgct
gtaacgccacttgtgggttgcatgggcgctgaagcgccgactgtggcggcccctcagtcc
gcgcaggcaccggctgcccatgacgagacaacgcagccgtacctgcgagagagtcgggag
atggtctcctatgtaccccttgcgccgccgccgccgtcgcctcccctcctgcgacccgct
ggcacggacgacactgcggagctcttctacggtctgccgcgtgaggttggccacttctac
gcaacacggcgcggtgtcacgtcgctgtacgactggcagcacgacgtgctcactcgcccc
gaggttcggcagggcggcaactttgtctacagtctccccaccagcggtggcaagacgctg
gtcgctgagctgagcctcctgcggtgtgtgctgaaccgccgcaagtcgtgcttcctcgtc
ctgccctttgtgtcgcttgcggaggagaagacgatggcgctacagccgctgacgacagcg
tacgacttcaacgtggacggccactacggcagctccggccgcttcccgctctccggggcg
cctgcagtctacgtctgcacgatcgaaaaggcgaactcgctgctgaatcacatgctcgag
gagggtcgcaccgacgagattggggcagtggtggtggacgagctgcacatggtcggcgag
tccgggcgaggggcgacgctggagttgttcctttccaaggtactcgtgatcaacgccgcg
cggcagcggaagcgcgacgccgtggttgcaccggcgacgcagagtcgctgcagtgcgagc
ggtttgcggccaggatggccggaggagttggaggacgcagaggaggacctccatgaaagg
gcagtcatgacggacaccgcgaaggcggcttcggaccccggctctctgcagataatcggc
atgagcgccacagtccccaacctccgcacccttgccgagtggctgcgcgctgcgtacttt
gagtacgacttccggcctgtgccattgcacgcttacagtgtcgttggcggcctcgtgcta
cgcgatggccagcacaacgagcgcaacctcagcagcgactctgtcacgcagcatcttgta
gagctcgcgacggaggtgccggatgcgtccgtgctcatcttctgcgccagccgccagcag
tgcgtcgacacagcgaagggcatcgtcaactacctcaaggctcaagccattgccggccaa
aaagtgccgtccccgtggatgtcgggtagtagcgatgcagcggcggaggcacagcatgtc
tccgtgcttggcgtaccgttcccaagcttaacgagagggccggtcacagcggctgcgatg
gcggcggtgcccccgcaggcctcggctgccatcaaaggcctccttgcggacctcgaggcc
ctcgcgcaccacgaagcctcgcagctcagtgaagtaattgcctttggagtagcatttcac
cacggcggcctccttgccgaggagcgagacctcatcgagacggcgttccgccgcaagcac
atccgcatcttgtgctgtacctctacactggccgctggcgtgaacctgccggcgcggcgg
gtaatcatcaaaacgccgtacgtgggccgcgagtttctcacgaagtcacgctatctgcag
atgtgcggccgtgccgggagagccgggttggacccgtacggcgagtcgttcctgctgctg
agcagccgtgatcaggcgcgcggtcacgccctcatgcatgccgcggtggagccgtgcagc
agcaaactcctcgaggacgatcaagcgctcacccgctcgctgctggagtgcgttggggtc
gggctcgtggcggacttccaaagcgcctgtgagtggagcggctcactgctgagcaggtgg
gcggtgggtcctgtggacgcgtcgtggcagccgcacatcgctgcagctgccgccccggct
gtgcccgcgagcactggagtggcgcctcccggagcggcagcgaatggcacgcgcgaaagt
gtcaccggcctcttcctcgcctccggagtcggctatgacggcgacgccactgccgcacaa
gactctgagagcagccggtctgcgcctggcccttcggcatcaccgccctcccaccccgcc
tcgccggcgtcgccgcctctgacgtgcgtgccgccgactgccatgaaggcgatggtgcgc
gcctcgctcgttacactagcgcgctgcggcttcatccgcgttgcctgtacacgcgtaggc
agcggcggcagcaacggcgccatcaccgtgaacaacacagatactatcagcacgttcacc
ggcaccggcgccggtactggcggcggtgactgtgctgctgctgggactacagtcggtaag
gacaatggtaccgcatcgagcgcgtctccggagacgttgccgagcagcatatcggacgac
gcccacgcagacgcttcagcagagacgcaagacgcctgtcatgcgcaggtgcttgtgaca
tcgtttggcagttcgtccgtccgctcgtgctttagtgtggaggaggcgctgctgctgcgc
gccgagctggacgagttgcgccacaccggtctcatcttgtccgacgacctgcacctatgc
tacttcctcacgccgctgcgggaggtgggaaagtgcgactgggagctgctgcggctcatg
atgtcgcgcatgagcgacagtcgccagcgcattgcgagcctgcttggtgtcgatgcctac
tttgtcgatcagcaggcgatggggctcggcggtccgctgcaggccacagaggagggccga
cggcgcctcttcacggcaaggcggttctacgtggcacttatgctggcggatgtgctggct
gaggtgccgatggcgacggtggagcagcggtataacgtgagccgcgggcagctgcagaat
ctgatgcgctccgcctcgatgttcagcagctccatcacgagcttctgccacgcgatggag
tggttctcgctagaagcggtactctcgtccttcgtcaagcgactcggcttcggcgtgaag
ccggacttactgccgctgatggagatacgtggcatgcagccgccgcgggcgagggcgctg
tggagcgccggcttcaagaagctcgcagcgatcgcggcggccgacgcggatgacatggta
tcgaaggtgaagtcgatgaacccgaaggacagcaaggcagcgaagttttttacgaagcgc
tcggcgttgatggcgatccgggaggcaaacctcgccctacagtcgcagatcaaggagaag
aagggcgagctgcaggaactgacggtttgttgcggcggtggtggcggcgttcgcggtgcg
cgctga
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