Leishmania major: LMJF_23_1550
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Entry
LMJF_23_1550 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lma
Leishmania major
Pathway
lma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMJF_23_1550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_23_1550
03041 Spliceosome [BR:
lma03041
]
LMJF_23_1550
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
LMJF_23_1550
Spliceosome [BR:
lma03041
]
Complex B
Other components
Prp19-related factors
LMJF_23_1550
Complex C
LMJF_23_1550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
Suf
NRDE-2
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
5652164
NCBI-ProteinID:
XP_001683515
UniProt:
Q4QAY3
LinkDB
All DBs
Position
23:756508..758892
Genome browser
AA seq
794 aa
AA seq
DB search
MDGDPRVSALQWEVAKEASTSPKTWAELARTTAAATAADPVERANAVTLVYERALRAFAS
SYKLWMAYISYRQRETSRMCGPNEWFQAVREVYERALTELPKMPMLWVSYMEFVVASEVP
RVTMTRHILARALAALPATQHHHLWKIAKRWCAMPIVPSATVRAVWWLYLSFQRSLHAKR
EYFQVLVQKGDFNGFLQECVRLGLPDKSNKGAVEERDLLLSDVSFWETVQTALQGKGWRF
TGDIGRLRELVALGKLRCASPVELSMAFAVFLYGQGHMREGRQELRQLLDEAPEAQTLIS
LYHLAVEMEDQLVESFAVDPDLRGLDDAAYNGVVQHLFGDGDPLRHLERLAREFPLLLNQ
AQLRNSPHNAALWLKRVELLQEDVYAGRSTFDDLVALYRQAIQQCTAGMSRVDGAAAQLF
SSCAQTLIRGGKLDSAIAVLSEGTWCVPFTSAALNVQLLGLLVEVQLMSFASPLSVRDAL
AERLTSGARSGASKRSRNGLLQSSAALPRVAHHPHAWIMWCDVCAAYDSANAAAWHRLVE
ALASSPAFSAEAACYVAHKAYVCRQESIAVMMLERAVAATRQQPTAQLFVLEQYLSFLCV
RDGRQVPLHQFREVFSLVQQVTPVAIRTAPSAVIDLYVSCAYMEAAIGLYGTAVRMMQEI
SLVATAALRGRDEHLRVLQAILEHSITFTEQRRGYNSVRAYCGALVQRLQHALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTNVEEFEKVARRRQQA
SIRFNKRQSAKGAE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacccgcgcgtgagcgccctacaatgggaggtggccaaagaggcctcgacg
tcgcccaagacgtgggcggagctggcccgcaccaccgctgcggccactgcggctgatccc
gtggaaagggcgaacgcggtgacgctagtgtacgagcgcgccttgcgtgcgtttgcctct
tcctacaagctgtggatggcttacattagctatcgccagcgggagaccagtaggatgtgc
gggccgaacgagtggttccaagcggtgcgcgaggtgtacgagcgggcgttgacggagctt
ccgaagatgccgatgctctgggtcagctacatggagtttgtcgtcgcctctgaagtgccg
cgtgtgacaatgacgcggcacatactcgcgcgcgccctggccgcgctgccagcgactcag
caccatcatctctggaaaattgcaaagcgctggtgcgccatgcccatcgtgcccagtgcc
acagtgcgggctgtctggtggctttatctctccttccagcgctcactgcatgcgaagcgg
gagtactttcaggtgctcgtgcagaagggcgacttcaatgggtttctgcaagagtgcgtg
cgcctggggctgcccgacaagtcgaataagggcgccgtcgaggagcgtgacctgctcttg
agcgacgtgagcttttgggagacggtgcagacggcactgcaaggaaagggctggcgcttc
acaggcgatatcggccggctgcgtgagctggtcgctcttggaaagctgcgctgcgcctct
ccggtcgagctctccatggcctttgccgtttttctttacggtcaggggcacatgcgagag
ggccgacaggagctgcgccagctgctggacgaggcaccggaggcccagacgctgatctcg
ctctaccaccttgccgtggagatggaagaccaactcgtggagtcttttgccgtggatccc
gatctccgaggcctcgacgacgccgcgtacaacggtgtggtgcagcatctcttcggtgac
ggcgacccactcaggcacctcgagcgacttgcgcgcgagttcccgctgctccttaaccag
gcgcaactgcggaacagcccgcacaatgcagcactgtggctcaagcgtgtggagctgctc
caggaggacgtctacgccggccgctccacctttgacgatctcgtcgctctttaccgccag
gctattcagcagtgtactgcaggtatgtcgcgtgtagacggcgcggcggcgcagttgttc
tcttcttgtgcccagaccctcattcgtggcggcaagctggacagcgccatagcggtgctc
agtgagggcacgtggtgcgtgccattcaccagtgccgctctaaacgtgcagctccttggt
cttcttgttgaggttcagttgatgtcgttcgcctcgcccttgtcagtgcgggatgctctc
gcggagagactgaccagcggtgctcgcagtggcgcttcaaagcgcagccgaaacgggctt
ctgcagtcgagtgcagcgctgccccgcgtggcgcaccacccacacgcgtggatcatgtgg
tgtgacgtttgcgctgcctacgactcggccaacgcggccgcttggcaccgccttgtcgag
gcactcgccagctcgcccgccttctccgcggaagccgcctgctacgtggctcacaaggcc
tacgtctgtaggcaagagtccattgcggtcatgatgctggagagagccgtcgctgccacg
cggcagcagcctaccgcacagctttttgtgctggagcagtacctctccttcctgtgcgtc
cgcgacggccgacaggtgccgctgcatcagttccgcgaagtgttcagccttgtgcagcaa
gtgaccccggtcgccatacgcactgcaccgtctgccgtcatcgacctgtacgtcagctgc
gcttacatggaggcagcgatcggcctatatggcacagctgttcgcatgatgcaggagatt
tccttagtcgctactgcagcgctgcgggggcgtgatgagcacctccgtgtcctgcaggcc
attcttgagcactctatcaccttcacggagcagcgcaggggctacaattcggtgcgcgcg
tactgcggggctcttgttcagcgcctccagcacgcacttctgctgcagcgtgttgcgctt
cactgggccgcgatcgagaagcgctctggcaacacggcacaggcgcatcttatcctcgac
gcgtgcggggacagccaggacccgtccacggagcatggcgaggtgtactggcggctgtgg
gagtctctatgcacaaatgtggaggagtttgagaaggtggctcggcgacgccagcaggcg
tcgattcgcttcaacaagcgccagagtgcgaagggggcggagtag
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