Leishmania major: LMJF_24_0990
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Entry
LMJF_24_0990 CDS
T01014
Name
(RefSeq) putative replication factor C, subunit 1
KO
K10754
replication factor C subunit 1
Organism
lma
Leishmania major
Pathway
lma03030
DNA replication
lma03410
Base excision repair
lma03420
Nucleotide excision repair
lma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMJF_24_0990
03410 Base excision repair
LMJF_24_0990
03420 Nucleotide excision repair
LMJF_24_0990
03430 Mismatch repair
LMJF_24_0990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lma03032
]
LMJF_24_0990
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_24_0990
DNA replication proteins [BR:
lma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LMJF_24_0990
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LMJF_24_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
Zeta_toxin
RuvB_N
AAA_14
AAA_16
AAA_5
AAA_22
nSTAND3
NPHP3_N
AAA_assoc_2
RNA_helicase
AAA_28
NTPase_1
AAA_7
AAA_19
AAA_18
AAA_6
Motif
Other DBs
NCBI-GeneID:
5652264
NCBI-ProteinID:
XP_001683614
UniProt:
Q4QAN4
LinkDB
All DBs
Position
24:342390..344375
Genome browser
AA seq
661 aa
AA seq
DB search
MAAVAASAAGTANPEPSRSELWADKYKPHSIAEMCYPVCANKLKAWLEAFTPIASPSDDP
KKPHGVLLSGSPGVGKTTTVYVVAHELGRTVVEYNASDFRSRKSLKENVSDLINNHAFSA
RATSYTNVILLMDEVDGCDIGGVGEVIEMLKSTRIPILCTCNDRWHPKLRSLLNYVEDMR
FSHPPCTIVANYLCDRVLAREGISLSKPLLQDIIKNSGSDIRNMLNNLQLWCLSRTSLEQ
RQLAECAAQSTKDSDAGLFGAAEYFLLQGTSRGERHSMAEMQACYYNADLVDMFVQENYL
HYNPQPVDGRDWMEAVSQAATSISRSDAAQSIMYYQQNWSVSRFHVLSSSIAPCVYTRGK
YETFMTGQQKFFDMQRPVKFPTWLGHNSSANKNRRLLRCVAMQASHPAKGVSGSQEDVVA
DYIPHGWERPLTVPLATKGKDGVAEVIAFMDEYHLMRDDWDLVQALPHYKHMQSPSSMAL
PANIATAVKSAFTREFNKTHRLDSFAKSTLRRGDGETQDDDEGDRGNSAGGNRQAGKVVA
DGVTAVRVTGGRDAAATKKNGKVAAGAATTSTTAAATRKPRAKKSAPAEGAARPTAKKKA
ATSSTRATAKALTAKTTTKRKRARAAASESETESVSSSPSSSSSSSASSSSSSSSDASDS
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtggctgcatcggcggctggcacggcgaaccccgagccgagtcgcagcgag
ctgtgggcagacaagtacaagccgcactccattgccgagatgtgctaccccgtctgcgcg
aacaagctaaaggcgtggctggaagcctttacaccgatcgctagtcccagcgatgatccg
aagaagccgcatggcgtgctcctgtccgggtccccaggtgtgggcaagacgacgacggtc
tacgtggtagcgcacgaactgggccgcaccgttgtggagtacaacgcgagcgacttccgc
agccgcaagtcgctcaaggagaacgtgtcggacctcatcaacaaccacgccttttccgcg
cgcgcgacgtcgtatacaaacgtgattctattaatggacgaggtggacggctgcgacatt
ggcggtgtcggcgaggtgatcgagatgctcaagtccacccgcatcccgatcctgtgcacg
tgcaacgatcgctggcaccccaagctgcgttcgctgctcaattacgtggaggacatgcgc
tttagccacccgccgtgcaccatcgtggcgaactacctctgcgaccgtgtcctggcgcgc
gagggtatttcgctctccaagccgctcctgcaggacattatcaagaactccggtagcgac
atccgcaacatgctcaacaacctgcagctctggtgcctgagccgcacctcgctcgagcag
cggcagctggccgagtgcgccgcgcagtcgacgaaggacagcgatgccggcctctttggc
gccgccgagtacttcttgctgcagggcacgtcgcgtggggagcggcactccatggcggag
atgcaggcctgctactacaacgccgacctagtcgacatgtttgtgcaggagaactacctg
cactacaacccgcagccggtggatgggcgggattggatggaggctgtctcgcaggctgct
acatcgatctcgcggtcggacgcggcgcagagcatcatgtattatcaacagaactggtcc
gtgtcccgcttccacgttttgtcctccagcattgccccgtgcgtgtacacgcgcggcaag
tacgagaccttcatgacggggcagcagaagttcttcgacatgcagcgaccggtgaagttc
ccgacgtggctcgggcacaactcctccgcgaacaagaatcgccgtctgttgcgctgtgtc
gccatgcaggcgtcgcaccctgcgaagggcgtgtcagggagccaagaggacgtggtggca
gactacataccgcacggctgggaacgcccgctgacggtgccgctggcgacgaagggaaag
gacggcgttgccgaggtcattgccttcatggatgagtaccacctcatgcgcgatgactgg
gacctcgtgcaagcgttgccgcactacaagcacatgcagtcgccgagctccatggcgctg
ccagccaacatcgccaccgccgtcaagagcgccttcacgcgtgagttcaacaagacgcat
cgtcttgacagcttcgcaaagagcacgctgaggcgcggcgatggggagacgcaagatgac
gacgagggcgatcggggtaacagcgccgggggcaatcgccaagcgggcaaggtggttgcg
gacggcgtaacggctgtgcgcgtcacaggcggccgtgacgcggctgccacgaagaaaaac
ggcaaagtggctgcgggcgctgccacgacatcgacgacagcagcagcgacacgcaagcca
cgggccaagaagagcgccccggctgaaggagctgccaggccaactgcgaagaagaaggcc
gccacgagctcgacgcgggccacggctaaggcattgacggcgaagacaacaacaaagcga
aaacgcgcgcgcgcggcggcctcggagagtgagacagagagcgtgtcgtcgtcaccgtcg
tcgtcatcctcctcatctgcgtcctcttcgagcagcagcagcagcgatgcctctgacagt
gagtag
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integrated database retrieval system
