Leishmania major: LMJF_24_1370
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Entry
LMJF_24_1370 CDS
T01014
Name
(RefSeq) putative histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lma
Leishmania major
Pathway
lma03082
ATP-dependent chromatin remodeling
lma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LMJF_24_1370
03083 Polycomb repressive complex
LMJF_24_1370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lma03036
]
LMJF_24_1370
Enzymes [BR:
lma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LMJF_24_1370
Chromosome and associated proteins [BR:
lma03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
LMJF_24_1370
HDAC complexes
Sin3A-HDAC complex
LMJF_24_1370
BRAF-HDAC complex
LMJF_24_1370
REST complex
LMJF_24_1370
SHIP complex
LMJF_24_1370
MiDAC complex
LMJF_24_1370
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
LMJF_24_1370
Heterochromatin formation proteins
Other heterochromatin formation proteins
LMJF_24_1370
Chromatin remodeling factors
NuRD complex
LMJF_24_1370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
5652304
NCBI-ProteinID:
XP_001683654
UniProt:
Q4QAJ4
LinkDB
All DBs
Position
24:487535..489145
Genome browser
AA seq
536 aa
AA seq
DB search
MSSPEQLPALSAAGSSSSRVASSHHSPHEASLPFPASAIPGDASAESPRASSMSRSSRAS
EESAATSPLQRKPDAPMPRLGGRKVLYFVDHSVTAIAYAEGHLMRPSRVRALHALVHSLG
LDNAECMTVCHARPATAEEMGAFHRSAYLECLRQAPVICGNPLDEMSLAFQKEFDVPFAS
QDSDCPLFPEVWALVSSQAGASLACAEALVRGDATVAMNWAGGMHHAAAAHASGFCFVND
IVLCIRRLLRYYQRVLYVDLDVHHGDGVEGAFYGNHRVMTLSLHQFGNGFFPGTGDYPTR
ETADSFAINVPLPTRTGDAAYLLSFRTALSSVVQCFDPEAMVVQCGADTIAGDLIGRLCV
TTLAHTQCVADVLSLERPTVLLGGGGYHVFHTARCWAIHTATALGRTAAQLPLYIPRTDP
YYMDYRRECTPKRPTLHVFLDPDVDDPLPLGDSLAFWRQLCCSIQWQMHTARLVRQGFTR
TLQLCRQRRAALLRQFATQEAGRESGIGVSGPKRPRSANATDRDANEGVEDRVVSA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcccgagcaacttcctgcgctctcagcggcgggctcatcgtcgtcgagagtg
gcttcctcgcatcactcaccgcatgaagcatcgctcccgtttcccgcatcagcgattcct
ggcgacgcctctgcggagtctccgcgcgcgtcgtcgatgtcacggtcttcaagggcgagc
gaggagagcgcagcaacatcgccactgcagcgaaagccagatgcaccgatgccacgcctt
ggggggcggaaggtgttgtactttgtggatcactctgtcactgcgatagcctatgcagag
ggtcatttgatgcggccgtctcgtgtgcgtgcgctgcacgcgcttgttcattccctgggc
ctcgacaatgcagaatgcatgactgtatgtcatgctcgtccggcgacggcggaggagatg
ggggcgttccaccgcagcgcgtacttggaatgtctgcggcaggcaccggtcatttgcggg
aatccgctggacgagatgtccctggcttttcagaaggaattcgacgtcccgttcgcgtct
caggacagcgactgtcctctcttccctgaggtgtgggcgctggtatccagccaagccggc
gcctcgcttgcctgtgcagaggcccttgtacgcggcgatgccacagtggcgatgaactgg
gcaggtggcatgcatcacgctgctgccgcccatgcgagcgggttctgctttgtgaatgac
attgtgttgtgcatccgccggctgctgcggtactaccagcgcgtcctctacgttgacctg
gacgtgcatcacggggacggcgtggagggggccttttatggcaatcaccgcgtgatgacg
ctctcgctgcaccagttcggcaacggcttcttccccggcaccggcgactacccgacgcgt
gagacggccgacagcttcgccatcaacgtcccgctgcccacgcgcacgggagatgccgcg
tacctcttgtcgttccgcactgcactctccagcgtggttcagtgctttgatccggaggcg
atggtcgtgcaatgcggcgcggacaccatcgcgggcgacctcattgggcggctttgcgtg
actacgctggcgcacacgcagtgtgtggccgatgtgctgtcgcttgagcgaccgacggta
ctgcttggtggaggcggttatcacgtgtttcacacagcgcgctgctgggcgatccacact
gccaccgcgctgggtcgcacagctgcacagttgcccttgtacatcccgcgcacagacccc
tactatatggattaccggcgcgaatgcacaccgaagcgtccgacgctgcatgtgtttctc
gaccctgacgtcgatgatccgctgccactgggggacagcttggcgttctggcgtcagctc
tgttgcagcatccagtggcagatgcacactgcccgccttgtgcggcaggggtttacccgt
acactacagctttgccggcagcgacgggcagcgttgctgaggcagttcgctacgcaagag
gcagggcgggaatctggtatcggtgtcagtggccctaagcgcccgcgctcagcaaatgca
accgaccgcgatgccaacgagggtgtggaggaccgagtggtctcggcgtga
DBGET
integrated database retrieval system
