Leishmania major: LMJF_24_1420
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Entry
LMJF_24_1420 CDS
T01014
Name
(RefSeq) putative mismatch repair protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
lma
Leishmania major
Pathway
lma03430
Mismatch repair
lma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LMJF_24_1420
03460 Fanconi anemia pathway
LMJF_24_1420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_24_1420
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
LMJF_24_1420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
5652309
NCBI-ProteinID:
XP_001683659
UniProt:
Q4QAI9
LinkDB
All DBs
Position
24:504044..508156
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AA seq
1370 aa
AA seq
DB search
MGSIHKLTDDVINRIAAGEVVQRPSAALKELLENAIDAGCSRVQVVAAEGGLEVLQVCDD
GSGIHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALASISYVSRMTVTTRRRQTCD
ESGNGASGAGSCSFSTAGAAVAWRCQYLNGTLLEDPQPCAGNPGTTVRVEKLFYNALVRR
RSLRASEEWGRIVDVVSRYALAFPAIGFTCCRDRAYGCASGGGGSSTGSLSRLGGGGNGS
NSAGAPANPGGSAAGGLCFPPRSNTRQNIRLSHGTQLASHLRLVYAYNVETATALSCGAE
PDTDSEPLASEVEAEDGALSAGDEPGQLPTSSSASSSTQALPSTLSTASRQSAAREARVF
AQMEQRARRVRATCGSAGEGLFTLVGYTSDPTLAQRKPYLCVFINQRLVESAAIRKAIDA
VYSGVLTGGHRPFTVLLLSVPTDRVDVNVHPTKKEVCLLDEELIVSRVAEVCRGAVLEAA
AARQMDMLKMRHTAALVLRQQLPSADGVGAADNSATAELSGSSIQHILEKLREQHQRGAP
LASPLTSSSLTSTAAVAPAGAGVGGVGPNVVVAPCTMVRVEPQKGALDKYFSQRLAAAAA
PAAATALAPTSSPSSLSSSRTAQEILSRDSVPDQLRAEAEEPLKDGDRRQESAIQRAKKG
DATNGQSQTTAAYEAPSWEAVMASLHGQRAPATSTTTAAADDDSHGFPFASPLRKEICSG
ESNDMATHAVQTSREAVDNGGEGNAGLAVPHVLQVTMERTARRGAGGADSAKARAALLDE
ESADGCDNDEDEDDGMREFKRHRREVHERAQLLQRVTGGAAAAAAMDEAAVEHDASSAAI
LCPRDHVRPSSAAEVEKAQLAVVHLGAVVRASDMLRSEAAAADASHFSYTVVSCEDSNMD
EEKSQADASTNGAPAGVMASLVDVAEVPAPALLSSVSMIVDRLLAEASPTADNLVDQLSF
VGTVDSRAFLAQAGTTLLWCDTMALTRHVVFQRIFLRWCQPALPAPPVLAFATPVRLADL
LLLALAYDGPHLQPPSATLLAVVEECAKKRQQQQAVVAGGGAAQLATSSLTTDAVRQTGG
ATARAWREVLFNADMESKTLSPNDLHTESGAGGVFAGSESVLPQPEDATMRYVRRLVRRL
CRWRGLLKEYFYIDITADGLLVGLPYGLNRHWPPRMRAVPVMVWLLAEAVPYPGTAAPSS
STMSGAADQTGPTSAAWQSNEGRGAEEVVACVATSTSPATSLAPTQTEATPTTTPQPTAM
EAEADGVAQEVACFTAVARHIAETLYGLPPPPPSTPPTSAEGPDTATADVAAGATDTASA
ELWREELVRHGLFACLKNPQLCRLPDQCLRDGTIQSLVSVESLYKVFERC
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtattcacaaactcaccgacgacgtgatcaaccgcattgcagccggtgaggtg
gtgcagcgacccagcgcggccctaaaggagctgctggagaacgcgatcgatgcggggtgc
agccgtgtgcaggtcgtggcggcggagggtgggctcgaggtgctgcaggtgtgcgacgac
gggagcggcattcacaaggaagacctgccgctgctgtgcgagcgctatgcgacgagtaag
ttgcagactttcgaggacctgcaccgggtcacctccttcggctttcgcggcgaggctctt
gcgtctatatcgtacgtgtcacgaatgacagtgaccacacgtcgccgccaaacgtgcgac
gagagcggcaatggcgcgtccggtgcaggctcgtgctcattttccactgctggagcagcg
gtcgcgtggcgctgccagtatctaaatgggaccctcctcgaggacccccagccgtgcgcc
ggcaaccccggcaccacagtccgcgtggagaaactgttctacaatgccctcgtgcggcga
cgctcgcttcgtgcctcagaggagtgggggcgcatcgtggatgttgtgtcgcgctacgct
ctcgccttccccgcgatcggattcacctgttgccgcgacagggcctacggctgtgcctct
ggcggcggcgggtcttcgacgggttctctgagccggctgggaggcggcggtaacggcagc
aactcagccggtgcccccgccaacccgggtggttccgctgctggcggcctctgcttccca
cctcggtccaacacacggcagaacatacgactctcgcacggtacccagctcgcctcacac
ctgcgcctcgtgtacgcctacaacgtggagacggcgacggcgctgtcatgcggtgcagaa
cccgatacagactccgaacccctcgcgtcggaggtggaggcggaggacggcgcgctcagc
gcaggtgacgagccggggcagctgccgacgtcatcatctgcatcctcgtccacccaagcg
ttgccgtcgacgttgtctacggcgtccagacaaagtgctgcccgggaggcgcgtgtgttt
gcgcagatggagcagcgggcgcggcgcgtgcgtgcgacttgcggctcagccggcgagggc
ctcttcactctcgttggctacacaagtgaccccacgctggctcagcggaagccgtacttg
tgcgtctttattaaccagcgtcttgtcgagagcgccgcgatacgcaaggcgattgacgcc
gtctacagcggtgtcctcaccggtggccaccgccccttcaccgtgcttcttctctccgtc
cctacggaccgggtggacgtaaacgtgcacccgaccaagaaggaggtgtgtctcttggat
gaggagctgatcgtgtcgcgggtggcggaggtgtgccgcggggctgtgctcgaagcagca
gcggctcggcagatggacatgctgaagatgcgccacaccgctgccctggtactgaggcag
cagttgccgagcgccgacggtgtcggtgctgcagacaacagcgcgacagcggagctgagt
gggagcagtatccagcacatactggagaagctgcgggagcagcatcagcgtggtgccccg
ctcgcctcgcctctcacatcgtcatccctcacatccacggcagccgtggcgccggcggga
gcaggggttggcggcgtaggaccgaacgtcgtggtggcgccgtgcacgatggtccgcgtc
gagccacagaagggggcactagacaagtacttctcccagcgactcgccgcagctgccgcg
ccggcggcggccaccgcgttggcacctacctcctctccgtcctccttgtcatcgtcgcgc
accgcgcaagagatactgtcacgggactcggtgcccgaccagctccgcgcagaggcggag
gagccgctgaaggatggggataggcggcaggagtcagcgatccagcgcgcaaagaaaggt
gacgctaccaacggccagtctcagacaactgccgcttacgaagcaccgtcgtgggaggcg
gttatggcctccctgcacgggcaacgcgcgcctgccactagcaccaccactgccgctgcc
gacgatgacagccatggcttccctttcgcgtctcctttgcggaaagagatctgcagcggc
gagagcaacgacatggcaacacacgcagtccagacctcccgtgaggcagtagacaacggc
ggcgagggcaacgctggccttgctgttccacatgtgctgcaggtcacgatggagcgcaca
gccagaaggggcgccggcggggcggactctgcgaaggcacgcgccgcgctgcttgatgag
gaaagtgcagacggctgcgacaacgacgaagacgaggatgacggcatgcgcgaattcaag
cgtcatcggcgcgaggtgcatgaacgagcgcagttgctgcaacgggtcactggtggagct
gccgctgctgcagcgatggacgaggctgcagtggagcacgacgcgagctccgcggcgatt
ctctgtccgcgtgatcacgtgcggccgtcgtcagcagcagaggtggagaaagcgcagctg
gccgtggtgcacctgggcgcagtggtccgagcttcggacatgctacgaagtgaagctgcc
gccgcagacgcttcgcacttttcgtacaccgtcgtctcctgcgaagacagcaacatggac
gaagagaagagccaggcagacgcctccaccaacggtgccccagctggtgtgatggcgtcg
ctggtggacgtcgccgaggtgcctgcgccagcgctgctatcgagtgtgtccatgattgtg
gaccgccttctcgctgaagccagcccaacggcggacaacctcgtcgatcagctctccttt
gtgggcactgtggactcgcgtgcctttctggcgcaggcggggaccacgctgttatggtgc
gacaccatggcgctgacgcgacacgtcgtcttccagcgtatctttcttcgctggtgtcag
cctgcgctgccggcaccaccggtccttgcattcgccacaccggttcggctggcggatcta
cttctgctcgcgttggcttacgacgggccgcacctgcagccaccctcagcaacgctgttg
gcggttgtggaggagtgtgcgaagaagcggcagcagcagcaggcggtcgtggctggcggt
ggcgcggctcagctagccacgagttctctgacaacggatgcggttcggcagacgggcggt
gcgactgcgcgcgcgtggcgagaggtactgtttaatgctgacatggagagcaaaaccctg
agtcccaatgacctgcacaccgaaagcggcgctgggggcgtctttgctggctcggagtcg
gtgctaccacagcccgaggatgccacgatgcgctacgtgcggcggctggtgcgccgtctg
tgtcgctggcgggggttgctgaaggagtacttctacattgacatcaccgccgacgggttg
ctcgttgggctgccctacggactcaaccggcactggccaccgaggatgcgggctgtgcct
gtgatggtgtggcttttggcggaggcggtgccgtaccccggcactgcagctccgtcttcc
tctacaatgagcggtgcagctgatcagacgggcccaacaagtgccgcgtggcagagcaac
gaaggccgaggcgcagaggaggttgtcgcgtgcgttgctacgtccacatcaccggcaacc
tccctggcgccaacgcaaacagaggcgacgcccaccacgacgccgcagcccaccgccatg
gaggcagaggcggacggagttgcgcaggaggtagcgtgtttcacggcggtggcgcggcac
attgcagagacactgtacgggcttccaccacctcctcccagcacaccgccgacctctgcc
gaaggccctgataccgctacggctgacgtggccgcaggggcgaccgacacggcgtctgcg
gagctttggcgggaagagcttgtccggcacgggctcttcgcgtgcttgaagaacccccag
ctctgccgtctaccggaccagtgcttgcgggatggcacgatccagtcgctggtctcagtg
gagtctctctacaaggtgtttgagcgctgctga
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