Leishmania major: LMJF_24_1530
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Entry
LMJF_24_1530 CDS
T01014
Name
(RefSeq) putative ATP-dependent DEAD/H DNA helicase RecQ
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lma
Leishmania major
Pathway
lma03440
Homologous recombination
lma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMJF_24_1530
03460 Fanconi anemia pathway
LMJF_24_1530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lma03032
]
LMJF_24_1530
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_24_1530
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMJF_24_1530
DNA replication proteins [BR:
lma03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
LMJF_24_1530
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
LMJF_24_1530
Bloom's syndrome complex (BTR)
LMJF_24_1530
FA (Fanconi anemia) pathway
LMJF_24_1530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Choline_kin_N
Motif
Other DBs
NCBI-GeneID:
5652320
NCBI-ProteinID:
XP_001683670
UniProt:
Q4QAH8
LinkDB
All DBs
Position
24:564457..569532
Genome browser
AA seq
1691 aa
AA seq
DB search
MRFVAKQLREAQHHRDDLVFLEDEEHDASDELQQLDVRIAELEQRFAHFRVFQARLLSRP
TPASTPPSFSSMSSSLVRSPRATSVMDFGGGIYGNAAAQISSGAHGPGIGSSAGVAGYTG
GGEQRGPLMQSTAPSPCPAAPTSGPPSAAGATGAPPPCGDWPTTITEYSVNRGDIGGCAP
ALPGPWVSDGNGGTTSFRSAECSAFSARKGFSWEAYEQQVDPEALSRDALSRTAHVELPV
NPTHQYGGERFPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLC
YQLPALMPNPAQVTIVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWASG
HVVHTLVYVTPEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPDYRKLSV
LKRQFLRTPITALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVRGKQVIP
VVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEAASKNERQERWTRD
ELQVICATIAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDR
QRQERLIHGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDVHFCLTQRAAAGG
GAMPPLPPTSAASVSAVTQLCDNCASKLAEGWTVKEVDVGNILLDLYAIILRLGTMTSKQ
LIGVYRGSVSEIGRAVEMRMRVKGTPAEYKTGAKHSKVLLDRTLLEGMHLGLLEERLDSI
NDFAVCAFVELGGTPAAQQLHRDIKAGHRVITLRLRDVKARSGKGDASFGAVASAVSGAT
AKDDMPLVELFDSAQRQAAVGDGRGTRASAAAPEKKRRKPAAKKGRRGSRYVLDEADGST
DDDEGAISSIEEDSAMSNSMASFIDDESGSTATLSYISSVTTPQRDGTGASAAAAGRRQR
TSLTARSQDGVFSTLSEDTQGQPQVHRPPRKRTRGDAADQRAAVAQRGLGGAAAALAAPA
STVPAARLERLKALLQEEMDRLVQTLVSQAVGCRSYNVMPKSTILRLTETLAIPGWGSVG
DLIDLEGMGKNKVKRYGADILRVYRHFRYIHIGDVEELSEAEAAEVKDVKTAVRPRNRLG
RANASAGELIAENDGEEECGGDGDRLASTTASGFAGGIDIEAGAMTGRATHQQAQRPILL
DPATPEKARASVSSAAGTPSRDSGSGVALPGTLGDQPRQRRTMFTFSSTTAAAPAAVSIS
IGSRSSSPRLSLQAHEGCAAAPPLPPPANPAAAVNGAADSYDQLTCDPSVANAHGNTRMI
AAPGAGAALPPHEPHPHQLPMPQFSAPLFPEPPAWQTPATAAAASVVPISGTPAPLLLPH
NSTAGRNAHLFSPSAPSFASASALLGGAGLPMAQRPCPQVPQQPSTMMTLAAPSDAVRGG
DPSLADTLRGSGQTGAAHAAENSELLIGSSPIPTQQQQQLRHTYFSNCQSAPQTLSGSVG
ETGEGQQSSSGVVLLGADGPTQGPWMPPTSTAGRAHDAPPPPPPHAGKDMHSVEYLMGLC
NDARSRTPLSGRPSGSATRGGGGPSRSTMPVPARSAVYSTVAATANADHAVSHSLPCPTA
GGRPLGSGSTLSSSCAEESISFSERPLFQTSTPESAPQPKLQKQEDGAAAGGDNGAGRDR
QEVFTVDDDSE
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcgtcgccaagcagctccgcgaggcgcagcaccaccgcgatgacctcgtgttc
ctcgaagacgaagagcacgacgcgtcagacgagctacagcagctagatgtgcgcattgca
gagctggaacagcggttcgcacacttccgcgttttccaggcaaggctgctgagccgcccc
acacccgcctcgacgccgccgtccttctcttccatgtcgtcctcgctcgtgcggtcaccg
cgcgccacatcggtgatggatttcggcggtggaatctacggcaacgcggcggcgcagatc
agcagcggcgcgcacggcccaggtatcggcagcagcgctggcgttgccggctacaccggc
ggcggcgagcagagaggcccgctgatgcagagcactgcgccatcgccgtgtcccgccgcg
ccaacgagcggccccccttcagcagcaggggctactggcgcaccaccaccatgcggtgac
tggcccaccaccataaccgagtacagcgtaaaccgcggagacatcggcggctgtgctccg
gcgctgcccggtccgtgggtctccgacggcaacggaggcacgacgagcttccgcagtgcc
gaatgttcggccttctccgctcgcaaagggttctcgtgggaggcctacgaacagcaggta
gacccggaggcgctgtcgcgcgacgccctgtctcgcaccgcgcacgtcgagctcccggtg
aaccccacgcaccagtatggcggcgagcgcttcccgtggtcggcggagcttcggcgcatg
atgcgcgaggtgttcggtttacacgactaccgcttctgccagctcgagatcatgaacgcc
tgcatggacggccgcgatgtttttgtgttgctgccgacgggcggcggcaagtccctctgt
taccagcttcctgcgctgatgcccaacccggcccaggtcaccattgtcgtgtcgccgctc
atctcgcttattcaggatcaggtgtacgcgctgatcgcgaacgacatccctgccatggcc
ctcaccggacagaccaacgacgctgctcgccgcagtctcttccaggagtgggcctccggc
cacgttgtgcacacgctcgtgtacgtgaccccggagtactttggccgcagcgaccacttt
gtgggcacgctgcaggggcttgccgacaaggggctgctctgccgcttcgtgattgacgag
gcgcactgcgtgtcgcagtggggtcacgacttccggccagattaccgcaaactctcagtg
ctgaagcggcagtttctacgtacacccatcacggcgctgaccgccacggcgacggatctc
gtgcagcaggatgttatcaagacgcttgccttgcgcgacgccatcatcttcaagggctcc
ttcaaccgagccaacctcaagtactcggtgcagcacgtgcgaggcaagcaggtgatcccg
gttgttgaggacctcgtactgcaccgattctcgccgtcttcgtgcggcatcgtgtactgc
ctgtcgcgcaaggactgcgaggagatggcggcggcactcgtacgcaggggcattaaggcc
tcctactaccactccgaggcggcgtcgaagaatgagcggcaggagcggtggacgcgtgat
gagctgcaggtgatttgcgccaccatcgcgtttggcatgggcatcaacaagccagatgtc
cgctacgtcgtgcacgcggctatgcccaagtccatcgaggggtactaccaggagagcggc
cgcgccggccgtgacggtttgccgtcggagtgcgtgctgctgagcaccactacagatcga
cagcggcaggagcggctgatccacggctcgaaagactggcgcgcgtcgctcacctcgctg
caccgcatgctggcttacaccctcaacgacgtcgactgtcgccggcgccagcagctgcac
cactttggtgagcaggtggacgtccatttttgccttacgcagcgggctgccgctggcggt
ggtgcgatgccgccgctgccaccgacgtcggccgcatcggtgtctgccgtcacgcagctg
tgtgataactgtgccagcaagctggccgagggctggacggtgaaggaggtggacgtgggc
aacattctgcttgatctatacgccattatcctgcgtctcggcaccatgacgtcgaagcag
ctgatcggcgtgtaccgtggctctgtctcggaaattgggcgcgccgtcgagatgcgcatg
cgcgtgaagggaacgccggcggagtacaagactggtgccaagcactcgaaggtacttctg
gaccgcacactgctcgaggggatgcatctcgggctcctcgaggagcggctggacagcatc
aatgacttcgccgtgtgcgcctttgtagagcttggcggcaccccagcagcgcagcagctc
caccgcgacatcaaggctgggcaccgcgtcataacactgcgcctgcgagacgtgaaggcc
cgcagcggtaaaggggatgcaagcttcggcgctgtggccagtgctgtttcgggcgccacc
gccaaggacgacatgccgctcgttgagctgtttgactctgcccaacgacaggcggccgta
ggcgacggccgcggcacacgggcttcggcggctgcgccagaaaagaagaggcgcaagccc
gcggcgaagaaggggcgccgcggcagcaggtacgtgctagacgaggcagacggcagcact
gatgacgacgaaggggcgatttcatccatcgaggaagactctgcaatgtcgaacagcatg
gcgtccttcatcgacgatgagagcggcagcacggctaccctatcctacatctccagcgtg
acaaccccgcagcgcgatgggaccggggcatcggcagcagctgctggtcgccgacagcgc
acatcattgacggccaggtcgcaggacggcgtcttctcgacgctgtcggaggacacccaa
ggccagccgcaagtgcatcggccgccgcggaagcgcactcgcggtgatgcggccgaccag
cgagcagctgtggcgcagaggggcttaggcggtgctgctgctgcacttgcggctccggcg
tcgaccgtccctgcagcgcggctggagcgcctgaaggcgcttctgcaggaggagatggat
cggctcgtgcagaccctcgtgagccaggcggtggggtgtcgaagttacaacgtgatgccc
aagagcacaattctgcggctgaccgagacgctcgccatccccggctggggcagcgtcggc
gacctcatcgacctggaggggatgggcaagaacaaggtgaagcggtacggcgccgacatc
ctgcgggtgtatcggcatttccgctacatccacataggcgacgtcgaggagctgtcggag
gcggaggcggcggaggtgaaggatgtgaagacggccgtgcggccgcgcaatcgcctcggc
cgcgcaaacgcctccgctggcgagttgatcgctgagaatgacggggaggaggagtgcggc
ggtgatggtgaccgactagcgagcacgaccgcgtctggttttgcgggcgggatcgacatc
gaagcgggagcgatgaccggccgtgcaacgcatcagcaggcgcagcgcccgatcctgctg
gatccagccacgcctgagaaggcgcgcgcatcggtgtcctcggccgctggtaccccatct
cgcgatagcggcagcggtgtggcactgccaggcaccctcggcgaccagccgcggcagcga
cgcacaatgttcaccttttcatccaccacagctgccgctccagcggcggtgtccatcagc
atcggctcccgatcatcctccccacggctgtctcttcaggcccacgaggggtgtgcagct
gcaccaccactaccaccgccagcaaatcccgctgccgcagtgaacggtgccgcggacagc
tacgaccagctcacgtgcgatccatcggtggccaatgcacatggcaacacacgtatgatt
gctgcccccggtgcaggagccgctctgcctccgcacgagccgcatcctcatcagcttccc
atgccgcagttctccgcgcctctatttccggagccgcctgcatggcagacgcctgccact
gccgccgctgcttctgttgtgccaatatcgggcacgccggcgccgctgctgctgccccac
aacagcactgccggcagaaacgcccatctgttttctcccagcgcaccctcctttgcatcc
gcctcggcgctgctgggcggagcagggcttcccatggctcagcgaccgtgtccacaagtg
ccccagcagccgtccacgatgatgacgctggcggcgccttctgatgctgtgaggggtggt
gaccctagcctggcagacacactccgaggaagtggtcagaccggcgccgctcacgcggcc
gagaacagcgagctgctgatcgggagtagccctattcccacgcagcagcagcagcagcta
cgtcacacatacttctctaactgtcagagcgctccgcaaacgctcagtggaagcgtcgga
gagactggcgaggggcagcagagtagtagcggcgtggtgctgctcggcgccgacggacct
actcaagggccctggatgccgcccacgtctacggcgggccgcgcgcacgacgcaccgccg
ccaccaccgccgcatgcgggaaaggacatgcacagcgtcgagtacttgatgggcctctgc
aatgacgcccggtcccgcacgccgttgagcgggcggccgtctggctcggcgactcgcggc
ggtggggggccctctcgatccacgatgccagtgccagcacgctccgcggtttattccacc
gtcgcggctacggcgaacgccgaccatgctgtgagccattcacttccctgccccacggcg
ggcggaagaccactcggcagtgggtcgacgttgtcctcgtcctgcgccgaggagtccatc
tccttctcagagaggccactttttcagaccagcacgccagaatccgccccacagccgaag
ctgcagaagcaagaggatggtgcggccgcaggtggtgataatggcgctggccgtgacagg
caagaggtcttcaccgtcgacgatgactcggaataa
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integrated database retrieval system
