Leishmania major: LMJF_24_1680
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Entry
LMJF_24_1680 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lma
Leishmania major
Pathway
lma03022
Basal transcription factors
lma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMJF_24_1680
09124 Replication and repair
03420 Nucleotide excision repair
LMJF_24_1680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lma03021
]
LMJF_24_1680
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_24_1680
Transcription machinery [BR:
lma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMJF_24_1680
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMJF_24_1680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
Motif
Other DBs
NCBI-GeneID:
5652340
NCBI-ProteinID:
XP_001683685
UniProt:
Q4QAG3
LinkDB
All DBs
Position
24:complement(629932..631272)
Genome browser
AA seq
446 aa
AA seq
DB search
MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRFVERYLDSTPLASLGVVVMRDGISHR
LLPCTTNRNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALAAATAKKSSS
VAARNPRAAWKGSATQLNVIVLTASVTLIDPTDVFAVVNIMAVLSIRISVVSLVGAVHVF
DVCTVETGGTLYCPLNYDHLLHIMDELSTAHRAQVAVARKKRRQRGACRQRVKRCREEDD
EDVEVDDDDSDGADAPYLIPIGCPVYLEAPLSDSAEPSPAASSRSFYLGCPQCHLIQLTV
PTTCSMCRLLLCSAPMLYSTFVSHNSLVPPAKVLRVMRDASPPAPMADNLSAAATATAQE
GGVVKTTMQQPVRCGLCMTSFIAEVMMGHARNGGVGNPVSSSATATFVVDGAQVWQCSAC
ASYRCNACNDFVLHTIGLCPYCLALQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcactgtccttctcctcgacggcagcgatgccatgaacagtagctcagactac
ctgcccaactatctacttgccatgaggccgccattgctgcggttcgtggagcggtatctc
gactctacaccactcgcgtctcttggcgtggtagtgatgcgagatgggattagtcaccgc
ctgctgccgtgcacgacgaaccgcaacgagatcgtcgacgtgctggagcgtgacgtcttc
ctgcacggcggctctggcaacacgtcaatggagaacgggctacggatggccatgtcggag
ctggtggacatgcgcgaggtagcggccctggcggcagcgacggctaagaagtcttcgtcg
gttgccgctcgtaacccgcgtgcagcgtggaaagggtcagcgacgcagctcaatgtcatt
gtgttgacagcctctgtcactctgattgaccccacagatgtcttcgccgtcgtgaacatc
atggccgtcttgtccatccgcatcagtgtcgtttctctcgtcggtgctgtgcatgtattc
gacgtgtgcaccgtcgaaacaggagggacgctgtattgccctctcaactacgaccacctg
ctgcacatcatggacgagctgtcgacggcgcaccgcgcgcaggtagcggtggcgcggaag
aagaggcgccagcgaggtgcctgccggcagcgagtcaagcgatgtcgcgaggaggatgat
gaagatgtcgaagtcgacgacgatgacagcgatggcgccgatgcaccgtaccttatacct
attggatgccccgtgtatctcgaggctccgttatccgacagcgcagaaccatcacccgct
gcctcctcccgctccttctacttgggatgccctcagtgccaccttatccaactcactgtt
cccacaacctgctccatgtgccgcctgctgctgtgcagcgcgccgatgctgtacagcacg
tttgtatcgcacaactctctggtgccaccggcaaaggtgctccgcgtgatgcgggacgca
tcgccaccagcgccgatggctgacaacctgagcgctgcagcaacggccaccgcacaggag
ggcggcgtcgtcaaaacaacgatgcagcagccagtacggtgcggtctctgcatgaccagc
tttatagcagaggtgatgatggggcacgcacgcaatggcggagtcggcaaccctgtcagc
tcatcagcgacggcaacctttgtggtggatggagcgcaggtgtggcagtgcagcgcgtgt
gcctcgtaccgctgcaacgcctgtaacgactttgtcctccacactatcggcctctgcccg
tattgcctggcgctgcagtga
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