Leishmania major: LMJF_25_0620
Help
Entry
LMJF_25_0620 CDS
T01014
Name
(RefSeq) putative RNA polymerase I second largest subunit
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lma
Leishmania major
Pathway
lma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMJF_25_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lma03021
]
LMJF_25_0620
Enzymes [BR:
lma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMJF_25_0620
Transcription machinery [BR:
lma03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LMJF_25_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
5652471
NCBI-ProteinID:
XP_001683815
UniProt:
Q4QA33
LinkDB
All DBs
Position
25:complement(220863..225713)
Genome browser
AA seq
1616 aa
AA seq
DB search
MSSRSSHYSAKSLSSSAGESMVTSHSTGSSSRHRRTGTVCIHEPRAPPMKMTAMELLQHI
RNSITRLKYICERQYHTAALDQASEVAVTSFFERLRKKLSKLEFSRSHIGTPETGGPQQL
KYIAKEARQLMSTAQEVVRDTANTSVTATCVYEGMQHHHMQEAMAELEELSALLAERPNE
QPSRVSVDLLADLVAFHIDEFDAFMALRVEAFVREMQSEGAFYTGPVMTDASQKATPVGV
CSAVLLDVAVGVRPARSARIVLEHARHQISKVENRLHAADIALQECQLAGEVAAEGQQRQ
RAEVQRREFTIMKERIRHALRQLDRVQQAWLEEEQSIFTRAASGSHDLAALMQTKHLHEA
EVIEEVQRLHDQTIHACLPFATPQYHRRYGETYGQPCHVRLGFHFLPDANTAAEMAAAAG
STNAAAPSSLMLRTLSTEYFALMRQLRVAPVDYDTYDYLVPSKEQFWVNFASFPEMVKGA
RCALRNVDARLDHFRALEEQKEVGGYFIMNGGERILRALLMQRCNVPINIYREKFVTQGP
HFSAKAVVIRCKRPSGLTAQNYFYYTTQGEVIFSFARKVVWHLPAPLLLNAMSTQSVSAV
ELQRLLTIGMPDGNHVARVEALLQHHRRKPYGDLRHFIDYITVLGRMYREYHQNSSTFHF
LPLYAKGSTCQHDAWYGMFMVRRHVLPHLNSCDVATPDLAPDATAQKLLAWLSPALLAEL
DRKFDAMIAITRQLYLFIDGAVEHQGNDVPAYQELFTVSQVLMGAFEVCLNRYMRGFVYR
LARHLPAALFRRILSLRTLLPPVDAEDTMRQVRQFAEFCGRHGGSDPLDQLARLLVTGNI
NLDREEDFYCPQTSGWVVMAEHLNFYRFFEQLRCVHRGKTIADMRSSEVRKYPCEAYGFI
CMVQSPDGEDCGVLNHLSVSTISSNSPDAAMTAQLREIVRKAVPGVRSRATLSTVVDQLC
ETVPVWMEGELLGYLSPADAVEAAATLRERKALTLRSQVHVTGIVRRKDASPLHTLEVVY
VAPKSKDPAGLYVFYDCGRLMRPVQRLESSVRKDATHLPFPLVFIGTWEQSWLDIAAVPS
DPLDAVVQLNRKYEYMEQNGTNLISLTSATIPFFEHNCSPRNLFQCGLSKQSSGTQLQAL
AWRKEAKLFRTYCPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTA
AQRGMLTAGVTVAKIVTASGKGSDKDDVFVFHNLLSTGERFTAELEANGLPPKRANASLD
AFSFDRDHKYPGLRDNNDVYCCAKRVERVDPFTNKAVYEYTRHHATKWRHFDKGEDAWVQ
QVIPLVYSGPDPTSVLMIFRIPRPPTVGDKFSSRHGQKGTLPLHIRSHDLPFATASGITP
DVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDNSAWSTVDEQPRVAELIGEALVKAG
YNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARARTDAHTYRAVTKTGQP
VKGRKRHGGVRVGEMERDGLLSHGISEVVVDRLLHVSDKTKAFICPRCGSLLSLYERHAT
EYGTWRTCRFCGAGADESTDSIAMVEIPQVLRLWAAELTSIGIRVVLKTSELSDFV
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgctcatcacactatagcgcaaagtcgctctcctcctcagcgggggagtcg
atggtaacgagccacagcactgggtcctcgagtcgtcaccgtcgcaccggcactgtctgc
atacatgagccgcgcgccccacccatgaagatgacggcgatggagctcctgcaacacatc
cgcaactccattactaggctgaagtacatttgtgagcggcaatatcacaccgccgcgctc
gatcaggcgtccgaggtggccgtcacgtcgttctttgagcggctccgcaagaagctgtcg
aagctcgagttcagccgcagccacatcggcaccccagagaccggcggcccgcagcagctg
aagtacattgcgaaagaggcgcggcagctcatgagcaccgcgcaggaggtggtgcgcgac
accgcgaacacttccgtgacggcgacatgtgtttacgagggcatgcagcatcatcacatg
caagaggccatggcagagctggaggagctgtccgcgctcctggcagagcgccccaacgag
cagccgagtcgcgtgagcgtcgatcttctggcggacctcgttgctttccacatcgacgag
ttcgacgcctttatggcgctgcgtgtcgaagcgtttgtgcgggaaatgcagagcgaaggc
gccttctacaccggcccggtcatgacggatgcgtctcagaaggccacgccagtcggcgtg
tgttcggcggtgctgctagacgttgcggtcggcgtgcgaccggcgcggtcggctcgtatc
gtgcttgagcatgcgcggcatcagatcagcaaagtcgagaaccgtctgcacgctgcagac
atcgcgctgcaggagtgtcagctggcgggcgaggttgcggcagagggtcagcaaaggcag
cgggcggaggtgcagcgccgcgagttcaccatcatgaaggagcggatccgccacgccctg
cgccagctggatcgcgttcagcaagcatggctggaagaggagcaaagcatcttcactcgc
gccgcctccggtagccacgatctggcggcgctgatgcagacaaagcacctgcacgaggcg
gaggtgatcgaggaagtgcagcggctgcacgaccagacgatccacgcttgcctgcccttc
gccaccccgcagtaccaccgccgctatggtgagacgtacggccagccgtgccacgtccgc
ctcggcttccacttcctgcccgatgcgaacacggcagccgagatggccgccgctgctgga
tctaccaatgccgcggcgccgtcatcgctgatgctgcgcaccctctccacggagtacttt
gcgctgatgcgccagctgcgcgtcgctcctgtcgactacgacacctacgactaccttgtg
ccaagcaaggagcagttctgggtgaacttcgcgagcttcccggagatggtgaaaggggcc
cgctgcgctcttcgcaacgtcgacgctcgccttgaccacttccgcgcgctggaggagcag
aaggaagtaggcggctacttcatcatgaacggcggcgagcgcattctgcgtgcgttgctc
atgcagcgctgcaacgtaccgatcaacatttaccgcgagaagttcgtcactcagggcccg
cacttttccgccaaggctgtcgtcattcgctgcaagcggccaagcgggctgacggcgcag
aactacttctactacacaacgcagggcgaggtaatcttctcgttcgcgcgcaaggtggtg
tggcatctaccggcgccgctgctgctgaacgcaatgagtacgcagagcgtgtcggcggtg
gagctgcagcggctgctgacgatcggcatgccagatggcaaccacgtcgcccgtgtcgag
gcactcctccagcaccaccgccgcaagccctacggtgatctgcggcactttatcgactac
atcacggttcttggccgcatgtaccgcgagtaccaccagaactcatctacgtttcacttt
ctgccgctctacgcgaagggttcgacgtgccagcacgacgcgtggtacggcatgttcatg
gtgcgacgccatgtcctgccgcacttgaacagctgcgacgtggccacgccggatttggcc
cctgacgccactgcgcagaagctgctagcgtggctgtcgcccgctcttctcgccgagctg
gaccgcaagtttgacgcgatgatcgccatcacgcggcagctgtacctcttcatcgacggc
gctgtcgagcatcagggcaacgacgtcccggcttatcaggagctcttcaccgtctcgcag
gtgctcatgggtgccttcgaggtgtgcctgaaccgttacatgcgcggctttgtctaccgc
ctcgcacgtcacctgcccgcggcgctctttcgccgtatcctcagcctgcgcactctgctg
ccccctgttgacgccgaggacaccatgcggcaggtgcgtcagtttgcggaattttgtggc
cggcacggcggcagcgacccgctggatcagcttgcccgtctgcttgtgacgggcaatatc
aacctcgaccgcgaggaggacttttactgtccgcagacgtctgggtgggtggtcatggcc
gagcacctgaacttctaccgcttctttgagcagcttcgctgtgtgcaccgtggcaagacg
atcgccgacatgcgttcgagcgaggtgcggaagtacccatgtgaagcgtacggctttatc
tgcatggtgcaaagccccgacggcgaggactgtggcgtgctgaatcacctgagtgtgtcg
accatctcgtcgaactcaccggatgcggccatgacagcgcagctgcgggagatagtgcgc
aaggcggtgccgggtgtgcgcagccgcgcgacgctcagcacggtggtggatcagctttgt
gagacggtgccggtgtggatggagggcgagctgcttggctacctcagcccggcggacgct
gtggaggcggcggcaacgctgcgcgagcgcaaggcgctcacgctgcgctcgcaggtgcac
gtgaccggcatcgtacgccgcaaggatgcgtcgcctctgcacacgctggaggtggtgtac
gtggcgccgaagagcaaggacccggcgggcctgtacgtcttctacgactgcggacgactc
atgcggccggtgcagcggttggagtcgtcggtgcgcaaggatgcgacccacctccctttc
ccgctcgtgttcattggcacctgggagcagagctggctggatatcgccgccgtcccgagc
gaccccctcgacgccgtcgtgcagctgaaccgcaagtacgagtacatggagcagaatggc
acaaacctcatctccctcacctcggcgactatccccttcttcgagcacaactgctcgccg
cgcaacctgttccagtgcggtctcagcaagcagtcctctggcacacagctgcaggcgctg
gcgtggcgcaaggaggcaaagctgttccgcacctattgcccgcagcgctacatcagccgc
accctccccatggactactacggcctcgacgacgtgaacctcggcgtcaacgccgtgatt
gccattctcgcctacaccggctacgacatggacgacgccgtcatcatcaacagcaccgct
gcccagcgcggtatgctgacggccggtgtcacggtcgccaagatcgtgaccgcatctgga
aagggctccgacaaggacgacgtcttcgtgttccacaacctgctctccacgggcgagcga
ttcactgccgagctggaggcgaacggactgccgccgaagcgcgcgaacgcgagcctggac
gccttctcctttgatcgcgatcacaagtaccctggactgcgagacaacaacgacgtgtac
tgctgcgccaagcgggtggagcgggtggacccgttcacgaacaaggctgtctacgagtac
acgcgccaccacgccaccaagtggcgccacttcgacaagggcgaggatgcgtgggtccag
caggtgatcccgctcgtgtacagcgggccagacccgacatcggtgctcatgatcttccgc
atccctcgccctccgaccgtgggcgacaagttctcgtcccgccacggccagaagggtacg
ttgccgctacacattcgctctcacgacctgcccttcgccacggctagtggcataaccccg
gacgtcatcatcaacccccacgcatttccgtcgcgcatgacggtcggcatggtgctggag
atcatgaccgccaaggtcggtgccatcgagggtcgcttcatcgataacagtgcgtggtcg
acggtagacgagcagccgcgagtggcggagttgattggcgaagcgctggtcaaggcaggg
tacaaccgctacggccgcgagcacctgatcgatggcatcagcggtgaagagatgaaggca
gacgtgttcatgggcatctgcgggtatcagcgtctgcggcacatggttagcgacaagtgg
caggcgcgggcacgtacggacgcgcacacgtaccgggcggtaaccaagacggggcaaccg
gtgaaggggcgtaagcgccacggcggcgtacgggtcggggagatggagcgggacggcttg
ctatcgcacggcattagtgaagttgtcgtcgaccgtctcctgcacgtgtcagacaagaca
aaggcgttcatctgcccgaggtgcggtagcttgctctccctgtacgagcgtcatgccact
gagtacggtacatggcgcacctgccgcttctgcggcgccggcgcggacgagagcaccgac
tcgatagctatggtggagattccacaagtgctgcggctgtgggcggcggagctgacgagc
attggcatccgcgtcgtgctcaagacgtcggagctgtccgactttgtatga
DBGET
integrated database retrieval system
