KEGG   Leishmania major: LMJF_25_1315
Entry
LMJF_25_1315      CDS       T01014                                 
Name
(RefSeq) DNA-directed RNA polymerase II
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
lma  Leishmania major
Pathway
lma03020  RNA polymerase
lma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LMJF_25_1315
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMJF_25_1315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lma03021]
    LMJF_25_1315
   03400 DNA repair and recombination proteins [BR:lma03400]
    LMJF_25_1315
Transcription machinery [BR:lma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LMJF_25_1315
  RNA polymerase III system
   RNA polymerase III
     LMJF_25_1315
  RNA polymerase I system
   RNA polymerase I
     LMJF_25_1315
DNA repair and recombination proteins [BR:lma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LMJF_25_1315
SSDB
Motif
Pfam: RNA_pol_N Yippee-Mis18 UBA
Other DBs
NCBI-GeneID: 12981313
NCBI-ProteinID: XP_003721802
UniProt: E9ACT0
LinkDB
Position
25:complement(523535..523789)
AA seq 84 aa
MIIPVRCYSCGKVVGNLYEQYQRLLDQDYTEAEALDALHLDRYCCRRMILSHIDLIDDLI
PYSVPVTGTMQMIGPLQMPTPHRR
NT seq 255 nt   +upstreamnt  +downstreamnt
atgatcatcccggtgcgttgctactcgtgcggtaaggtggtcggcaacctctacgagcag
tatcagcggcttttggatcaggactacacggaggccgaggcgctggatgcgctgcatctg
gatcgctactgctgccgtcgcatgatcctctcccatattgatctgatcgacgacctcatt
ccttatagcgtacctgtgacaggcaccatgcagatgatagggccgctgcagatgcccacg
ccgcaccgccgctga

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