KEGG   Leishmania major: LMJF_25_1705
Entry
LMJF_25_1705      CDS       T01014                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
lma  Leishmania major
Pathway
lma03018  RNA degradation
lma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LMJF_25_1705
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMJF_25_1705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lma03019]
    LMJF_25_1705
   03041 Spliceosome [BR:lma03041]
    LMJF_25_1705
Messenger RNA biogenesis [BR:lma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LMJF_25_1705
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LMJF_25_1705
Spliceosome [BR:lma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LMJF_25_1705
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 5652651
NCBI-ProteinID: XP_001683929
UniProt: Q4Q9R9
LinkDB
Position
25:complement(688843..689238)
AA seq 131 aa
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDGAAEEDNGSV
VDEGVSTAFSGGDTASGALPPLEEVHLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATAVARSW
NT seq 396 nt   +upstreamnt  +downstreamnt
atgctctcccagtacctgcgcaagcgcgtctccgtggtgacggtagatggtcgtaatctc
gtcggcgtactccatgcagccgatcagctgctgaacatcgtactcacgtcctgcgtcgag
cgcactggcgcgccgtacgacttcgacgatggcgcggccgaagaggacaacggtagcgtt
gtcgatgaaggtgtctccacggctttcagcggcggtgacactgcaagtggtgcactgccg
cccctagaagaggtacacctgggcgtgatgatgctgcgcggtgccgacgtcgtctccatc
gctgccatcgacgtgtacgaagaggccggcacaaacgtgaaggattggcgcggacgggat
atgccgcctgccactgctgtagcgaggtcgtggtga

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