Leishmania major: LMJF_25_1705
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Entry
LMJF_25_1705 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
lma
Leishmania major
Pathway
lma03018
RNA degradation
lma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMJF_25_1705
09123 Folding, sorting and degradation
03018 RNA degradation
LMJF_25_1705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_25_1705
03041 Spliceosome [BR:
lma03041
]
LMJF_25_1705
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMJF_25_1705
mRNA degradation factors
5'-3' decay
Lsm complex
LMJF_25_1705
Spliceosome [BR:
lma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LMJF_25_1705
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5652651
NCBI-ProteinID:
XP_001683929
UniProt:
Q4Q9R9
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All DBs
Position
25:complement(688843..689238)
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AA seq
131 aa
AA seq
DB search
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDGAAEEDNGSV
VDEGVSTAFSGGDTASGALPPLEEVHLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATAVARSW
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccagtacctgcgcaagcgcgtctccgtggtgacggtagatggtcgtaatctc
gtcggcgtactccatgcagccgatcagctgctgaacatcgtactcacgtcctgcgtcgag
cgcactggcgcgccgtacgacttcgacgatggcgcggccgaagaggacaacggtagcgtt
gtcgatgaaggtgtctccacggctttcagcggcggtgacactgcaagtggtgcactgccg
cccctagaagaggtacacctgggcgtgatgatgctgcgcggtgccgacgtcgtctccatc
gctgccatcgacgtgtacgaagaggccggcacaaacgtgaaggattggcgcggacgggat
atgccgcctgccactgctgtagcgaggtcgtggtga
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