Leishmania major: LMJF_26_0420
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Entry
LMJF_26_0420 CDS
T01014
Name
(RefSeq) pseudouridylate synthase-like protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lma03016
]
LMJF_26_0420
Enzymes [BR:
lma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LMJF_26_0420
Transfer RNA biogenesis [BR:
lma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMJF_26_0420
Prokaryotic type
LMJF_26_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
5652772
NCBI-ProteinID:
XP_001684049
UniProt:
Q4Q9E9
LinkDB
All DBs
Position
26:complement(114341..116431)
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AA seq
696 aa
AA seq
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MRGKTARRRPDPRRMMVGKAPKNCVHIGLCVLYSGSGFRGLQIQVHAPTCHTVEGVLIQA
LKDAGIIADVVRGRPAGEHHHFARSCRTDRGVHAIRNMVSLFVPKEVFEKMGQAEGICEK
LNRQLPATVRVANVMQLSGSFIPRHCCNRRVYRYMLPLYALLPPCDTWAAVDKYYPGCLA
HVQALAEEAAAAQRTQYSIPYVDLEKMNAVARPADAQALPSSWLRDLKASADRCNQVLRS
HFTGSRRYHNFSVDIDSNRSGVSAKVIQPTTDEALRAIYRSEVCPRLFFFPCSTKGGAAD
EAPVPVHGESRTEYDMNLLRYPPRTPTSPEDTVGGSAAASTTTTPTGTSTTPATCLSPNT
TALPFLFFQIEGCSFLLNMIRKIIGSVLAVCRGARESILEDAFSPECRVTTPLAPGPYLY
LAQSTYHGYDRSIGGAGNAHQPGRLKTVQDAWGGAVSEAAELFAFHKIAADIVDVDLNAM
PPLDDILAARDRAREASRPHTAVEDAHLAEMKEYKPVLPTRIPWPASSDMTVFLRLLRVH
NWNVRPIQLDPACKALREIKNRKERLTASSVAAAASPGAEASKAGEADGGDTRANEATVE
QAATPTGDAWRIRSEGSSTGGVPEGGEDGWLYVADTPEEASVQRQAYFASLWKRARPWEY
DDATGKSLIHGGEVGTEDDFDDGDGSTARPRRHRRV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcaagacggctcggcgacgacctgacccgcgtcgcatgatggtcggaaaggca
ccaaaaaattgcgtccacattgggctgtgcgtcctgtacagcggcagcggatttcgtgga
ctgcagatccaggtccacgcaccgacgtgccacacagttgagggcgtgctaatccaagca
ctgaaggatgccggcatcatcgccgacgtggtccgcggacggcctgccggcgagcatcac
cactttgcccgctcctgtcgcactgatcgcggcgttcacgcgattcgaaacatggtgtcc
cttttcgttcccaaggaggtgtttgagaagatggggcaggcggagggcatctgtgagaag
cttaacaggcagctcccggccacggttcgcgtcgcgaacgtcatgcagctctccggcagc
tttatcccgcgccactgctgcaaccggcgcgtgtaccgctatatgctgccgctctacgct
ctcttgcccccgtgtgacacatgggccgcggtcgacaagtattaccccgggtgcctcgct
cacgtgcaagcgctggcagaggaggcggccgcggcgcaacgaacccagtacagtatcccg
tacgtcgacctagagaagatgaacgcagtcgcgcgtccggccgatgcgcaggcgttgccg
tcgtcgtggctgcgcgacctgaaggcgagcgcagatcggtgcaaccaggtgctgcgctcg
cacttcacaggctcgcgccggtaccacaacttctccgtcgacatcgactcgaaccgttct
ggtgtaagcgcgaaggttatccagccaacgactgacgaggcactgcgcgccatctaccgc
agcgaagtgtgcccgcggttgttcttcttcccctgctcgacaaagggtggagctgctgac
gaggcacccgttccggtgcacggcgagagcaggacggagtacgacatgaatcttctcagg
tacccgccgcgaacgcccacttcgccggaggacacggtcggcggcagcgccgcagcctcg
acgacgacaactcctaccggtaccagcaccacacccgccacatgcttgtcaccgaacacg
acagcgctgccttttctcttctttcaaatcgagggctgttcctttctgctcaacatgata
cgcaagatcatcgggtcggtgctggcggtgtgccgcggcgctcgcgagtccatcctcgaa
gacgccttctcgcctgagtgtcgcgtcacgaccccgctggcgccggggccgtacctgtac
cttgctcagtccacctatcacgggtacgaccgctccattggcggcgctggcaatgcacac
cagcctggccgcctcaaaacggtgcaggacgcgtggggcggcgcggttagtgaggcggcc
gagctgtttgcgttccacaagattgcggccgacatcgtggacgtggacctgaacgcgatg
ccgcccctggacgacatcctcgcggcgcgcgatcgtgcacgagaggcaagtcggccgcac
actgccgtcgaggacgcgcatctcgccgaaatgaaggagtacaaacctgtgcttcccact
cgcattccctggccggcgagcagcgacatgacggtgttcttgcggctactgcgagtccat
aactggaatgtgcggcctatccagctcgacccggcctgtaaagcgctacgtgagatcaag
aataggaaagagcggttaactgcctcctccgtggccgcagcggcatcgccgggggccgaa
gccagcaaagcaggagaggcggatggaggcgataccagggcgaacgaggccactgtagag
caggcggctacgcctaccggtgacgcatggaggatacgcagtgagggaagtagtacgggt
ggagtaccggagggtggcgaggatggctggttgtacgtggcagacacccccgaagaggca
tcggtgcagcgccaagcctactttgcaagcttgtggaagcgggctcgcccctgggagtac
gacgacgcgacggggaagtccttgattcatggcggagaggtcggcaccgaggatgacttt
gatgacggcgacggcagtactgctcggccgcggcgacaccgccgtgtctga
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