Leishmania major: LMJF_27_1550
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Entry
LMJF_27_1550 CDS
T01014
Name
(RefSeq) DNA-directed RNA polymerase II-like protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
lma
Leishmania major
Pathway
lma03020
RNA polymerase
lma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMJF_27_1550
09124 Replication and repair
03420 Nucleotide excision repair
LMJF_27_1550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lma03021
]
LMJF_27_1550
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_27_1550
Transcription machinery [BR:
lma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LMJF_27_1550
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LMJF_27_1550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
12982747
NCBI-ProteinID:
XP_003721963
UniProt:
E9ADD4
LinkDB
All DBs
Position
27:630289..630693
Genome browser
AA seq
134 aa
AA seq
DB search
MAVPHGMLISRNDITPDSLVDVPGDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLH
ESPFVQIAGYRVPHPTKHNVELRVQTASNGTDAPVPAPKKALQDAVDGCLKDLEVFEEQL
RREAQLKGLEASPS
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccctcatggcatgctgatttctcgcaacgacatcaccccagacagtctggtg
gacgtgccgggggatcgtaagattgtggagcaaatctccaacacgatggctaactcctcc
ctctttaagatggagaaggaggaccacacactggcgaacctgctgcgcatgaagctgcac
gagtcgccatttgtgcagattgcgggctaccgagtaccgcatccaacaaagcacaacgtg
gagctgcgcgtgcagacggcgtcgaacgggacggacgcgccagtccctgccccgaaaaag
gcgctgcaagatgcggtcgacggctgcttgaaggatttagaggtgttcgaggagcagctg
cgacgcgaggcacagctgaaaggtctcgaggcgtcgccgtcatga
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