Leishmania major: LMJF_28_0530
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Entry
LMJF_28_0530 CDS
T01014
Name
(RefSeq) RAD50 DNA repair-like protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lma
Leishmania major
Pathway
lma03440
Homologous recombination
lma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMJF_28_0530
03450 Non-homologous end-joining
LMJF_28_0530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lma03032
]
LMJF_28_0530
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_28_0530
DNA replication proteins [BR:
lma03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
LMJF_28_0530
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
LMJF_28_0530
BRCA1-C complex
LMJF_28_0530
NHEJ (non-homologous end-joining)
MRX complex
LMJF_28_0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
AAA_15
AAA_29
ABC_tran
DUF123
cobW
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
5653259
NCBI-ProteinID:
XP_001684331
UniProt:
Q4Q8L7
LinkDB
All DBs
Position
28:complement(184982..189064)
Genome browser
AA seq
1360 aa
AA seq
DB search
MTSIEKLQLCGVRSFDPNPTNQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPPG
SGTERGSFVYDPKVVGETEVKAQIRLIFTGKGGKLMQVIRSFQATRSAHRVTFTTLDNTI
AFQDLSTGEVISSTYRSSDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIF
DDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAEKESVVKA
IQGRSIGIEPELRGLRQAREALRTVEEQIEALQREVAVTNGRLEERREAVRRMGVPATSQ
TLEDLLEMRGSFTAQMQQLEEGLVQDTKRYDAAAARRRAQEEDMYKCRSNVQLLEREAQL
HKQNVAQLRELIQHLSHDHILSESNIDERSLQRLLQKAEDAVAAERQRARTASESVQQRI
RDAEDGAQCASRAVDGCKKEIEVREHAVENVRRRIKEHAAAIAALGGEGCRTQLRQAQVE
VEELQQRVAAAEELRKKGGGLHQSQRILMELEEQNSTVAQLREEMMQQKLLERQQQDLAL
MRQQIDEARAAVAAALQRDVLPILHEVGVQVPQEAAADSFSLPALTSLRSQASQVRQLKA
EELRALQTRALELEKACALQEQKMSYSTDELGQCRRAVDAGTRQCAGLFPDMDAYEEVLL
QAKEAAETAAQKRHALEALASCYHDFMVVAKGERMCAVCERPFDSDDSLESFLTRKADRQ
RTSPETLAAVQAAVNTTREAYQSLEKLQSVVVTVRQNRHRIPVLEAELDALEDKMKQNRA
EQREVCAARDAAQHEVHQLDTMYQHLCMVCTMGERTVALRDTLARKEKDFEAAQAEQQPH
ETQRKWGSGDGATGRAEPAPCSYEELCEAYAAATERLHKLNRQFTEAQRMERGQAENAAE
RELQERKAAMLQAEVAVAKLDDLESAARELQEEAAQHRTRVEELKRQAAEAQHSVEAHQQ
RVLQLRAERQKTEAAERGALDTAEKQLRELQLSLPPVLSYLHNGCARQLEELRMHLRETE
SAYKASAQEEEGLASRMKEARKTLSDQHRRSADMDRHIDVLQQEASIAADEAHLAEMERT
LASLKSDRLHDVEQLLGKEARQASLATLREMITAKITSLEKIRAQQDGNTEAMLLDVNQL
KQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIA
ELWRRTYRGSDIDTVEIRSETEGTTTTTARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLA
CIIIRLALSEAFCCDCGILALDEPTTNLDGDNARSLADALRTLIQARRAVKHFQLVVITH
DEQFVRALGGQSLEKFYYVHKDREGAFSVIDERTFDQLFA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatcgagaagttgcagctctgtggcgtgcgcagcttcgaccccaacccgacg
aatcagcagttcatccagtttcagaagccgttgacagtcattctcggcaagaatggtgct
ggcaaaaccactatcatcgaggcgctgctgaacgcgtgcacgggggccatgcctcccggc
agtgggaccgagaggggctcctttgtgtatgatcccaaggttgttggcgaaacagaggtg
aaggcgcagattcgactcatattcaccggcaagggtggtaagctgatgcaggtcatccgc
tcctttcaggccacacgcagcgcgcaccgcgtcacctttacaacactggacaataccatc
gctttccaggacttgtccaccggggaggtgatctcgagcacgtaccgctccagcgatgtc
gaccgtgtcgtgccggagatgctcggcgtgtcgccagctgtgctggagcacgtcattttt
tgccaccaggaggagtgcaactggccactgggaccaccgaaggatgtgaagcgaatcttc
gacgacatcttcgccgcgactcggtacgtcctcgcactggaccggctgcgcgacaacagc
aaggagtttcgccgccagctgaaagagcacgaggcgagtctgatggcgctacgagagcac
cgcgagcaagcaaagcagctggagcagcaaatagcggagaaggaaagcgttgtgaaggcc
attcagggccgcagcatcggcatcgaaccagagctacggggcctgcgccaggcgcgtgag
gcgctgcgtacggtggaggagcagatcgaggcattgcagcgtgaggtggcggtcacgaac
gggcgtctcgaagagcgtcgcgaggcggtgcgccggatgggtgtgccagccacgagccag
acgctagaggatctgctcgagatgcgcggcagcttcaccgcgcagatgcagcagctcgaa
gagggtctcgtgcaagacaccaagcgctacgatgctgccgccgcgcggcgacgcgctcaa
gaggaggacatgtacaagtgccgctcgaatgttcagctgctggagcgtgaggcgcagctg
cacaagcaaaatgtagcgcagcttcgtgagctcatccagcacctgtctcacgatcacatt
ctgagtgagagcaacattgacgagcgcagtctgcagcgtctgctccaaaaggccgaggac
gccgtggcggcggagcgtcagcgtgctcgcactgcctcggagagtgttcagcagcgcatt
cgagacgcggaagacggcgcgcagtgcgcctcccgcgccgtggatgggtgcaagaaagag
atagaggtgcgcgagcacgccgtggagaatgtgcgacgccgcatcaaagagcacgccgct
gccatcgcggcccttggcggggaggggtgccgcacgcagctgcgccaggctcaggtggag
gtggaggagctgcagcagcgtgtcgctgccgccgaagagttgcggaagaaaggtggcggg
ctgcaccaaagccagcgcattctcatggagctagaggagcagaatagcaccgtggctcaa
ttgcgtgaggagatgatgcagcagaagctgctggaacgccagcagcaggatttagcgctc
atgcgccagcagatcgatgaagccagggcggccgtggcagcggcgctgcagcgagacgtg
ctcccgattttgcacgaagtcggcgtacaagtcccacaggaggcggctgccgactctttt
tcattaccagccttaacgtctttgcgctcccaagcttcccaggtacggcagctgaaggcg
gaggagttgcgtgctctccagacacgcgcgctagagctggagaaggcgtgcgcgctgcag
gagcagaagatgtcctacagcaccgatgagctgggccagtgtcgccgcgctgtggatgcc
ggcaccaggcagtgcgccggcctcttcccggacatggacgcctacgaggaggtgctgctg
caggctaaggaggcggcggagacggctgcgcagaaacgccacgccctggaggccctcgcg
tcgtgctaccatgatttcatggttgtggcgaagggtgagaggatgtgtgctgtctgcgag
cgtccctttgacagcgacgactcgctggagagctttctgacgcgaaaggcggacaggcag
cgtaccagcccagagacgctagcggctgtgcaggcggccgtcaacacaacccgggaggcg
tatcagagtcttgaaaagctgcagagcgttgtggtgacggtgcgacagaaccggcatcgt
attccggttctagaggccgagctcgacgcgctggaggacaagatgaagcagaaccgcgca
gagcagcgtgaggtctgcgcggcccgcgatgctgcccagcatgaggtgcatcagctggat
accatgtaccagcatctgtgcatggtgtgcaccatgggagagaggacggtagcgctgcgc
gacacgctggcgaggaaggagaaagactttgaggcggcgcaggcggagcagcaaccacac
gagacacagcgaaagtggggcagcggcgatggcgccacagggagagctgaaccggcgccg
tgctcgtatgaggagctttgtgaggcttacgcggcggcgacggagcgactgcacaagctc
aacaggcagttcactgaggcccagcgaatggagcgcggccaggctgagaatgcggcagag
cgagagctgcaggagcgcaaggcagcgatgcttcaggccgaggtcgcggtggcaaagctg
gacgacttggagtcggccgctcgtgaactgcaggaggaggctgctcagcaccgcacgcgg
gtggaggagctgaagcgccaggcagcagaggcacagcactccgtggaggcccatcagcag
cgcgttctgcaactccgtgccgaacgtcagaagacagaggctgcggagcgtggtgctttg
gacacagcggagaagcagcttcgcgagctgcagctgtcgctgcctccggtcctcagctac
ctgcacaacggctgcgcccgccagctggaggagcttcggatgcacctgcgcgagaccgaa
agcgcgtacaaagcctcggctcaggaggaggaggggcttgccagtcggatgaaggaagcg
cggaagacacttagcgaccagcaccgccgctctgctgacatggatcgccacatcgacgtc
ctgcagcaggaggcatccattgcggccgacgaggcgcacttggcggagatggagcgcacc
ctcgcctccctgaagtcggaccggttgcacgacgtggaacagctgctgggtaaggaggca
agacaggcgagcctggccacactgcgcgagatgatcaccgccaagattacgtcgctggag
aagatacgtgcgcagcaggatggcaatacggaggcgatgctactcgatgtgaaccagctg
aagcagcagctgcgtggcgacaagtaccagaacattgagaagcgctaccggtccacgttc
ctgaaggtgcaaacgacggagatatccatccaggacatcgagaagtactacagtgccctg
gagaaagcggtacagtcgtaccaccaggagaagattgcacagatcaaccaaatcattgca
gagctgtggcgccggacgtaccgcggcagcgacattgacacggtggagattcgctcagag
acggagggcacgacgacgactacggcgcggcgcagctacaactaccgcgttgtcatgaag
cggggcaacaacgaaatggacatgcgtggtcgctgcagtgctgggcagaaggtgctcgcc
tgcatcatcattcggctcgcgctgagcgaagccttctgctgcgactgcggaatcctcgcc
cttgatgagccgacaacaaacctcgacggcgacaacgctcgcagtctggcggacgcgctg
cgcaccctcatccaggcgcggagggcggtgaagcactttcagctcgttgttatcacgcac
gacgagcagtttgtgcgtgcgctgggagggcagtcgctggagaagttctactacgtccat
aaggatcgagagggtgcgttctcggtgattgacgaacgcacctttgaccagctttttgcg
tga
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integrated database retrieval system
