Leishmania major: LMJF_28_1310
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Entry
LMJF_28_1310 CDS
T01014
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lma03009
]
LMJF_28_1310
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMJF_28_1310
Ribosome biogenesis [BR:
lma03009
]
Eukaryotic type
90S particles
Helicases
LMJF_28_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF2753
DUF3160
Motif
Other DBs
NCBI-GeneID:
5653342
NCBI-ProteinID:
XP_001684413
UniProt:
Q4Q8D5
LinkDB
All DBs
Position
28:487407..490109
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AA seq
900 aa
AA seq
DB search
MRAARDDAEDMRRAKAQAKQQRWQERQERSKDSREEIDKLQLRCADMHRELKDIAESNEA
NTSTEHEYSKFTELPISQRTQMGLERGHYTILTPVQKGTLHLALAGLDVLGAAKTGSGKT
LCFVIPVLERLYRERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHVLSAALLTGGRD
VQEERKRLHAISIIVGTPGRVLHHLQDDAELVLDNLQLFCMDEADRLLDMGFREAITSIL
AYLPPQRQSLLFSATQTTDVQMLAQMSLKNPRYVSTQAITAAPTPMTLCQNFVVVELHKK
LDALLMFLKRHPNDKIVVFVSTCNQVKFMHLAFSKILKKMRIPSMCLTSKMKQFRREEVF
LTFCRCKSAVLFCTDVASRGLDFPLVHWVVQYDCPESAQTYIHRAGRTARAGARGVSLLF
LTPRETPMLSYLHHKHVPLREIAIKPDFLTSSQEIFVALVVQGLKYEAQKAFIAYLRSVY
FASNKNVFEVAAVDVEAFAKSLGLPVVPDMSELQNLQRSAKNLPWDVVNFIAQRGGSGAD
KAGSTLTRKEKHLQATDMYRVMEQKQRFANKKGALHGDGASRGDSSSGDAGSDDDDFLVK
KEPAGASGCGASVSAKAGTVIADSNPLHLTVEERLAGLSKNKRRKLIENADIRVRDLRLN
QRIIFHDDDDESDEEADAMGNGGRSGAKGNAAHSSRSDDDADEENDTTVAGLLKHAVLRH
REQGCRDVDSDNDDADDADFTATLQTRVQANKADDLERAKKMRRLRRLQRQGRVSRKSTV
DESGIKTASGGPRPANSDDNADDGSGDYYDEHVDGSDAESTGSISRLLKAARGELYSDDD
TDEDGEEEESLCGSSSAARKRTRGNCTYHGIDSSDDNGSEGDADEVASPPPPLKRSRQRR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcggctcgcgacgacgccgaggacatgcgccgcgctaaggcccaggcaaagcag
cagcgctggcaggaacgccaggagcgctccaaagatagccgcgaggagatcgacaagctg
cagctgcgctgcgccgatatgcatcgcgaattgaaggacatcgccgagtcgaacgaggcg
aacacgtccacggagcacgagtactccaagttcacagagttgcccatctcgcagcgcacc
cagatggggctggagcgcggccattacacgatactcacacccgttcagaaaggcacgctt
cacctggccctcgccggcctcgatgtccttggcgcggccaagacaggctctggcaagacc
ctctgctttgtaatcccggttcttgagcggctctatcgcgagcgctggtcatcagacatg
ggggtcggggcactgcttctgagtcccacgcgcgagctggcgcttcagatcttcaaggtg
atgcagctcgtaggctacaagcacgtcctttcggcggcgctcctcaccggcggccgcgat
gtgcaggaggagcgcaagcggctgcacgccatcagcatcatcgtaggcaccccaggccgc
gtccttcaccacctccaggatgacgcggagcttgtcctcgacaacctgcagctcttctgc
atggacgaggcggaccggctgcttgacatgggcttccgcgaggccatcaccagcattctc
gcgtacctgccaccacaacggcagtcgctcctcttctcagctactcagacgactgatgtg
cagatgcttgcccagatgtccctcaaaaacccgcgatacgtctctacgcaggccatcacg
gccgccccaacaccgatgacgctgtgccagaattttgttgttgttgagctgcacaagaag
ctggatgcgctgctgatgttcctgaagcgccacccgaacgacaagatcgtcgtctttgtg
agcacctgcaaccaggtaaagttcatgcaccttgcgttctccaagatcctcaagaagatg
cgcatcccctccatgtgcctgaccagtaagatgaagcagttccgtcgcgaggaggtgttc
ctgaccttctgccgctgcaagtcggcagtgcttttctgcaccgacgtcgcctcgcgtggg
ctcgattttccactcgtgcactgggtcgtgcagtacgactgcccggagagcgcgcagacc
tacatccaccgtgccggtcgcacggcgcgtgctggggcgcgtggggtgagcctgctcttc
ctcaccccgcgtgaaacgccgatgctgagctacctgcaccacaagcatgtcccactgcgg
gaaatcgccatcaagcccgacttcctcacctcctcgcaggagatcttcgttgcgctcgtg
gtacagggtctgaagtacgaagcgcagaaggccttcatcgcgtacctgcgctccgtctac
tttgcctccaacaagaatgtcttcgaggtggccgccgtcgacgtggaggcgtttgcgaag
tcgctcggcttgcccgttgtgccggacatgtcagagctgcagaacctgcaacgcagcgcc
aagaatttgccgtgggacgtcgtcaacttcattgcgcagcgcggcggcagtggcgctgac
aaggccggcagcaccctcacccggaaggagaagcacctacaggcaacggatatgtaccgt
gtcatggagcagaagcagcggtttgccaacaagaagggtgcgctgcacggtgacggcgcg
agtaggggcgatagctcttcgggcgacgcgggcagcgacgacgacgactttcttgtgaag
aaggagcctgctggcgcctccggttgcggcgcatctgtctccgccaaggctggcactgtc
atcgcagactcgaacccattgcacctgaccgtggaggagcgcctcgcaggcctctccaag
aacaagcgtcggaaattgattgaaaacgcagacattcgcgtgcgcgacttgaggctcaat
cagcgcatcatcttccacgatgacgacgacgagtcagatgaagaggccgacgccatgggg
aatggcggcagaagcggggcgaaaggcaacgcggcacactcgtctcgcagcgacgacgat
gctgacgaggaaaatgataccaccgtcgcgggcctgctcaagcatgccgtgctgcggcac
cgcgagcaaggctgcagagacgttgacagtgacaacgacgacgccgacgacgcggacttc
acggcaacgctgcagacgcgcgtgcaagccaacaaagccgacgacctcgaacgtgccaag
aagatgcggcggctgcgacgcctgcaacggcaaggccgcgtatcgcgcaaatcaactgtc
gacgagagcggcataaagactgccagcggcggacctcgcccggccaactcggacgataat
gcggatgacggcagcggcgactactacgatgagcatgtggacggcagcgacgccgagagc
accggctccatcagccgtcttctcaaggcggcgcgcggcgagctctatagcgacgacgat
accgacgaggacggcgaagaagaggagagcctctgtggcagctccagtgctgctcggaag
cgcacacgtggaaactgcacatatcacggcatcgatagcagcgacgacaacggcagtgag
ggggacgccgatgaggttgcctctccgccgccgccgttgaagaggtcgaggcagaggcgc
tga
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