Leishmania major: LMJF_29_0550
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Entry
LMJF_29_0550 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_29_0550
03036 Chromosome and associated proteins [BR:
lma03036
]
LMJF_29_0550
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
LMJF_29_0550
Chromosome and associated proteins [BR:
lma03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
LMJF_29_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
12980911
NCBI-ProteinID:
XP_003722128
UniProt:
E9ADQ6
LinkDB
All DBs
Position
29:complement(202018..204660)
Genome browser
AA seq
880 aa
AA seq
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MSALMECPPEATEIAQCCAAIKAATPLTLSTPLAVAESQPTGGSTMRPKRPAHHDASVTS
QLMGKGGPTTFTHSFLEAVLNGRAKTTRALAPGTPLAHTDTTSGTAISFSGLASHTGSPG
NGARAGQRSASPGAATAAKATEKPSAQPSAPKPLGLVPADTGTIPQLLSVLREIALSCAS
LDTLDKVAGGSASFLRGADAAPFHTKPRSAASALVTAAAAPGAGTGGAGATSGGRSAAPP
MAIATAHPSHDLGITEEERWHRVCAHFEVLRGLVRNEHELTCALDEVLGVEWRGVSTPPY
LHAYEEGAAVAPSASPAVSADGLHISPAATLLGAPAAAAARSFAPVTPAPADHETPPTPS
FSAGSVPGGAGMPRTSTAGTSSAVTPTPTTTSSHTGTNVTGVVGVKSAASPGTTLSYNTP
PFQSRTPPSVQKQRSALFASAAPIPVAHSPAATANDAASSSMKQLSESSSTYSPSQHVAM
MLDRGTTPPPASRTQDEGEAGLVNFPSTPLSEAAAPYQPSASLMNTSPHGGNASTSNSAP
FHLETREEMLRRRSAAPNAFYASVSHRGATRFAGGPPSAATTPGTFMSSSLVPGVPPFSL
NGGAGGARSVPVSPLMSYSSPLGALPCPYEYLLVLDFEATCEEHPPPNYLYEIIEFPVVV
VDARLQRVVAEFHRFVRPRYKRELSSFCKKLTGMRQEDVDTAASLEEVIRQFERWLSHTL
PPHARCMFVTDGPMDLREFMYYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAM
LEVMHLPFEGRLHSGLDDARNIASIVIGLLHHGCSFCEVPINRLPFNGLLLTGANSGSGS
TPLLLPPSTAPATSCHTRSSEASPTTISAPYPVSDDDNSR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcactcatggagtgtccccctgaggccactgagattgcgcagtgctgcgcggcg
atcaaggcggcaacgccgctgacattgtccactccgctagctgtggcggagtcgcagcct
acgggtggttctactatgcgaccgaaaaggccagcgcaccatgacgccagcgtcacatct
caattgatgggcaaaggcggtcctacaacgttcacgcactccttcttggaggccgttctg
aacggtcgagcgaagacaacgcgcgcgttggcccctggcacgccactggcgcacaccgac
acgacgtctggcacagcaatctctttctcgggactagcgtcgcacaccggtagtccaggc
aacggcgctcgtgctggccagcgcagcgcgtcccctggcgccgccactgctgccaaagcg
accgagaagccgtcagcgcagccatccgcccctaagccgctggggctggtgccggccgac
acgggcaccattccgcagctactgagtgttctgcgtgagatagcgctctcatgcgcgtcg
ctggacaccctcgacaaggtggcaggtgggtcggcgtcctttttaagaggcgcagacgct
gcaccttttcatacaaagccacggagcgccgccagcgctctggtcacagcggccgctgca
cccggcgcaggtactggtggggccggcgccacctctggcggtcgctcggcagcaccaccc
atggcgattgccaccgcacatccttcacacgacctcgggatcacggaagaagagcgctgg
catcgcgtatgtgcccacttcgaagtgctgcgcgggcttgttcggaacgagcacgagctg
acgtgtgcgctggacgaggtgctcggcgtggaatggcgcggcgtgtcaacgccgccgtac
ctgcatgcgtacgaggagggcgctgctgtggcgccgagtgcgtcgccggcagtgtcggcg
gatgggctgcacatttctcccgcggcaactctcttaggtgcaccagccgctgcggctgca
cggtcgtttgctcctgtgacccctgcaccagctgatcacgagacgccaccaaccccgtcc
ttctccgctggctctgtgcctggcggggccggcatgccgaggacatccaccgctggtact
tcttctgccgttactcccacgccgaccacgaccagctcacacaccggcacgaatgtcacc
ggtgttgtcggcgtgaaatctgctgcgtcgccagggacgacgcttagctacaacacgccc
cccttccaaagccgcaccccgcccagtgtgcagaagcagcgaagcgccttgtttgcttcg
gcagcaccgattccggttgcacacagcccggctgccaccgcgaatgatgcagcctcctcc
tcgatgaagcagctgtccgagagcagctcaacgtactcgccgtcgcagcacgttgccatg
atgctggatcgcggcacgacgccgccgccggcgtctcgcacacaggatgaaggcgaggcc
ggtcttgtcaactttccttcgacgccgttgtctgaggcagcagcgccgtatcagccctca
gcatcgctcatgaacactagcccgcacggcggcaacgcgtccacgtcgaacagcgcgccg
tttcacctggagacacgcgaggagatgctgcggcgccgcagtgcggcaccgaacgcattt
tacgcttccgtatcgcacagaggcgccacgcgttttgctggcggccctcccagcgcggca
acgaccccaggcacgttcatgtcgtcctcgctggtgccgggcgtcccgccattctcgctc
aacggcggtgctggtggggcgcgcagcgtgccggtgtcgccgctgatgtcgtactcctcg
ccgctcggcgccttgccatgcccgtatgagtatctgcttgtgctggacttcgaggccacc
tgcgaggagcacccgccgcccaactacctgtacgagatcatcgaattcccggtggtggtc
gtcgatgcacgactgcagcgtgtcgtggcggagtttcaccgatttgtgcgcccgcgatac
aagagagagctcagctcgttctgcaagaagctgaccgggatgcggcaggaggacgtggac
acagcggcgtcgctggaggaggtcatccggcagtttgagcgctggctctcccacacgctg
ccgccacacgcccgctgcatgttcgtgacggatggcccgatggacttgcgcgagttcatg
tactatcacagcgtttcacgccaaggcatccgcttcccctcgctcttctaccagttcatc
gacgtgaagcagacctttgcctgtttcttccggtgttcgcaggggaagatcaaggcgatg
ctggaggtgatgcatctgccctttgaggggcggctgcatagcgggctcgacgacgcgcgc
aacatcgcgtccatcgtgattggtctccttcaccatggatgcagtttctgcgaggtgcca
ataaaccgcctgccgttcaatggactgctgctgaccggagcgaacagcgggagcggatcg
acacccctcttactaccaccctcgacggcgcccgccacatcctgccacacacgatcgtcc
gaggcgtcacccacaaccatctctgctccctaccccgtgagcgacgacgacaactctcgc
tag
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