Leishmania major: LMJF_29_0640
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Entry
LMJF_29_0640 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
lma
Leishmania major
Pathway
lma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMJF_29_0640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_29_0640
Enzymes [BR:
lma01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
LMJF_29_0640
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
LMJF_29_0640
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
LMJF_29_0640
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
LMJF_29_0640
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
LMJF_29_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
HIT
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
12980920
NCBI-ProteinID:
XP_003722138
UniProt:
E9ADR6
LinkDB
All DBs
Position
29:complement(241303..242532)
Genome browser
AA seq
409 aa
AA seq
DB search
MWCTRLCREEGLFRFLRNLFEVLDFVTERCRRCLDTSSCLLLLCASPLSSCSIGGPHTRG
CFNEILHRLSRGAQQPAHRRQSATSSHPRTPWRLHRFNDERVCVWGGNPPPQSTTGRHRS
LCTPFSLSHTPSTAWAPLLPADKHHMQASPVLAGAAVRRTATASVGSEPRTNLPFLINVV
KKAQKSANTVVASTPALSSMSSTKEPPIQAAAFKPYPLLSPGEVKQAAGSSLLYKDDVCV
LVNDAFPKSMVHCLVMPLDLRLQSLNALTKKDAPLLRHMLHVGDEYVRYLKTAVPHTYTA
RRFIAGFHALPSLPMLHMHVLSTDLDSPCLKNKKHYNSFATFFFLTGDRVLDDLERHGRV
TLNQDVTRLRQMEEQDMKCLWCGTALPSVPAMKSHIQCCPQNKAVEKSS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtacgcgcttgtgccgggaggaggggctgtttcgcttcctccgtaatctcttt
gaggtgctggacttcgtcacagagcgctgtcgtcgctgccttgacacgtcttcgtgtctc
ctccttctctgcgcctcacctctttcgtcttgctcgatcggcggcccccacacgcgaggc
tgcttcaacgaaatacttcatagactctctcgcggcgcacagcagccggctcatcggcgt
cagagcgccactagctcacacccacgtacaccttggcgactgcatagattcaacgacgag
cgcgtgtgtgtgtggggaggaaatccaccaccacagagcacaaccgggcgtcaccgttca
ttgtgtacccccttttctctctctcacacaccgtccaccgcgtgggcacctctcctaccc
gccgataaacaccacatgcaggcctcaccagtgctcgccggcgcggcggtgcgccgaacg
gcgacggcctccgtcggcagcgaacctcgcaccaacttaccctttctcatcaacgttgtc
aagaaggcgcagaagtctgccaacacggtggttgcgtcgacgccggcactctcctcaatg
tcgtcgacgaaggagccgcctatccaagccgccgccttcaagccatacccgcttctgagc
cccggcgaggtcaagcaggccgccggcagctccctcctctacaaggatgacgtctgcgtg
cttgtgaacgatgcattccccaaatcgatggttcactgcctggtcatgccactggacctc
cgcctacagtccctcaacgccctcaccaagaaggacgctccactgctgcgccacatgctg
cacgtgggggatgaatacgttcgctacttgaagacggcggttccccacacctacacggcg
cgccggtttattgcgggattccacgcccttccctcgctgcccatgctgcacatgcacgtg
ctgtctacggatctggacagtccttgtctcaagaacaagaagcactacaacagcttcgcc
actttcttcttcctcacgggcgaccgcgtcttggacgacctggagcggcacggccgcgtg
acgctgaaccaggacgtcacccgccttcgacagatggaagagcaggacatgaagtgcctg
tggtgcggcaccgcactgccaagcgtgcccgctatgaagtctcacatccagtgctgtccg
cagaacaaagccgtggagaaatcgtcgtag
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