Leishmania major: LMJF_30_1280
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Entry
LMJF_30_1280 CDS
T01014
Name
(RefSeq) putative vacuolar assembly protein vps41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
lma
Leishmania major
Pathway
lma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LMJF_30_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lma04131
]
LMJF_30_1280
Membrane trafficking [BR:
lma04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
LMJF_30_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
zf-C3HC4_2
zf-RING_2
WD40_WDHD1_1st
zf_RING_Vps8
Beta-prop_HPS5
WD40_CDC20-Fz
zf-C3HC4
zf-C3H2C3
zf-rbx1
Beta-prop_EML_2
PHD_NSD
zf_RING_Vps8_fungal
LysM
TPR_26
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
5653659
NCBI-ProteinID:
XP_001684723
UniProt:
Q4Q7H5
LinkDB
All DBs
Position
30:441224..445567
Genome browser
AA seq
1447 aa
AA seq
DB search
MKRHDSAGDASASPSPLAPLPAPVQEADHAHDGSRTSSSSSTPASHHTLEKRETASCGRT
RHSFPGGGENAGDDGVDGTENDSYTSYYEYDSSYDEENSNFVHSDKCRGSDSVDDDRFST
AASLLPQEDLLRFLSYTLAGAALKDHRLMAMEAFRHILVLGTNQGTVAVVEPSSGKLKEV
YTNHHEPICDVDCTINELYIAACDKAGYVTIQSRRDVKDVWMAELSGPIESVALHPLYHK
MDSCPMVCGGATKVLLLTKGVLWSNSRRVTTLQEGRGRIHKVRWCHTAAVDVVAWLSDAE
ITLYNMKSGAVARRVSLPGLPAQNALYPPTLRWEHNLSRDPTAAATSAATLLCGWGDVVQ
EVQLHADPHVRRLSGGGLFSVDRSPRSTLLQGGWRGTSSSPFPLRASFGSAAPASSPSPT
TVAEAAGRAPCVVELRTSQPLRPSTTLFPYRVCGIAPYGPQRYVVLAGIVEGGTEGVLKD
LEVRVVDRDSLTDVYRGRMPIRFIHPLQLRLTYLEFLPSLAAKPAPAASLPQLALPTDPL
APSPMMQYFILSVDTIVKAVPSDIDDHVEFLLCTSQFECAYRYAAAHARQLRRHVLEHVG
QQWLMHLFHNRSTEEGALLKIVELLPELIPRDNSAAWEQWIYRLDTCGESWRLIALLPAS
TGASAEYKVTSTQDMQEEQDAYAEHADAAARSLPRPVATLQTPIQREYYDLVLLRCLRHD
PSLFFAALHKFYTLFSVPVVLKATEVVYREQCAAAAWWEGDSSDEEKNDNDDKHVQTRDV
TASNASPTLNTASADQSGVPPGAPASPPPTTPQGTSEETSAPRAASDPSQLTTAGAGAAS
APSMSRTSRWSLVASYGFLLRCARRHEEALQVLLHLPASPRSDREVFGLIRDQQLFHKAR
ELLPELLHRREDATLQLLMEHVAEATGRNGVTDGGDAALVSQVVAAEADGTAPSSPSLDA
LQYGSAQDPLCTESVISCLEKSDRLHLLRYLNLVQRRYPEVFAQAAKRHAQLVATLYIDY
DRPSLLPFLKQMSMYVERIRELHALCHKHHFLEEEIFLLFRMGREDEALRILLERMHDLR
RALKFVVTVPDLEEQAALFTRLVDYTVAYNASLPTGSLDSANTATGGAGARMRYVMHHTK
PNETYASIAEQYHVALEDVCKANGVAGASGSAVSPPLSAAVEASKRCTSCSSPLQGQGEA
QRRASCDADASKDLPAPPPQCVVPLNLFGDLLRILAEPPFMEHPALDVRLVLPKLPSREP
ILHAGPSIAAIAHAMAEEIAFFSTVCKVGENDLMGYYGQLLKRRTAAIAMGRPRHPAESG
TTAINEAATTPRHAAAELAEGSSVVHRCAACRQLLAQRVVVFACQHMYHPACVLQYLRKS
PTDAFTGGGGAAFGGRAGGAVPVMRDGAALALPVTSTAAAGAETMEAQLRKLPVYCRACR
QHSGEQS
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccacgatagcgccggcgacgccagcgcgagcccgtcgccactggcgccgttg
ccggcgcctgtgcaagaagccgaccacgcgcacgacggcagccggacgagcagcagcagc
agcactcctgcctctcaccacacgcttgaaaagagagagactgccagctgcggccgtact
cggcatagcttccccggtggcggcgagaacgccggcgacgatggcgtagacggcacggag
aacgacagctacacgagttactacgagtacgacagcagctatgacgaggagaatagtaat
tttgttcacagcgacaaatgccgtggcagcgacagcgtagatgacgaccgattctcgacg
gcggcctctctgctaccgcaggaggatctcttgcgatttctcagctacacgcttgccggg
gccgcgctgaaggatcaccgactcatggcgatggaagcgttccgccacatccttgtactc
ggcacgaaccagggaaccgtcgcagtcgtcgagccgtcctccggcaaactcaaggaggtg
tacacgaaccatcacgaaccgatctgcgatgtagactgcaccatcaacgagctctacata
gcggcatgcgacaaggccgggtatgtcacgattcaaagccgtcgtgatgtgaaggacgtg
tggatggcggagctgagcggtccgatcgagtctgtcgccctgcacccgctataccacaag
atggacagctgtccgatggtgtgcggcggggcgaccaaggtactcctgctcaccaaaggt
gtgctgtggagcaacagtcggcgtgtcacgactctgcaggaaggacgcgggcgcattcac
aaggtccgctggtgtcacacggccgcggtcgacgttgtcgcgtggctatctgacgcggag
ataacgctctacaacatgaagagcggggccgtggcgcgccgcgtttctttgcccggcctc
ccagcacagaacgccttgtacccacccacgctgcgatgggagcacaatttgtcgagggac
ccgaccgcagctgccacctcggcggccacgttgctgtgtggatggggcgacgtggtgcaa
gaggtccagctgcacgccgaccctcacgtgcgtcgactcagcggcgggggccttttcagt
gtagatcggtcgcctcgctccaccttgttgcaaggtggatggcgaggcacgtcctcatcg
ccattcccgctgcgcgcgtcattcggcagtgctgctccggcatcatcgccatcaccaacc
accgtggctgaggcggctgggcgggcgccgtgcgttgtagagctgcgcacgtcacagcca
ctgcgaccgagcactaccttgttcccttaccgagtctgcggcattgccccctatggaccg
cagcggtacgtggttctggcaggcatcgtggagggcggcacggagggggtgctgaaggac
ttggaagtgcgcgtggtggaccgcgactccttgaccgacgtctaccgtggtcgcatgccc
atccgcttcatccatccattgcagcttcgtctcacctatctcgagtttctgccatcgctc
gctgcgaagccggcgcctgcggcgtcgctgccccagctcgccttgccaacggacccgttg
gcaccgtctcccatgatgcagtacttcatcctttccgtcgacacaatcgtgaaggcggtg
ccgtccgacattgatgaccacgtcgagttcctgctgtgcacaagtcagtttgaatgcgcc
taccggtacgccgcggcacatgcgcgtcagctgcggcggcacgtcctggagcacgtggga
cagcagtggctcatgcatctctttcacaaccgtagcacggaggagggggcgttgctgaag
attgtcgagctgctcccggagctgattccgcgtgacaacagcgctgcgtgggagcagtgg
atctaccgcctcgacacatgtggtgagtcgtggcggctcatcgcgctcctgccagccagc
acgggtgcctccgccgagtacaaggtgaccagcacgcaggacatgcaggaggagcaggac
gcgtatgccgagcacgctgacgccgcggctcggtccctccctcgcccagtcgccaccctg
cagacgccgattcagcgggagtactacgatctggtgctgcttcgctgcctccgccacgac
ccgagcctcttctttgccgcgttacacaagttttacacacttttcagcgtgcctgtcgta
ctcaaggcgacggaggtggtgtaccgagagcagtgcgccgccgccgcctggtgggagggc
gacagcagcgacgaggagaagaacgataacgacgacaagcatgtgcagacaagggacgtg
acggcgtctaacgcgagtcctacactcaacaccgcctctgctgatcaaagtggcgtgccg
ccgggggcgccagcttctcctccgccgactactccgcaaggcacttcggaggagacgagc
gccccaagggcagcctcggatccatctcagttgaccacggcaggtgccggcgctgcgtct
gccccgtcgatgagccgaacatcgcggtggtcgttggtggccagctacggcttccttctc
cgatgcgcacgccggcacgaggaggcgctgcaagtgttactgcacttgcctgcctctcca
cgcagcgaccgtgaagtgtttggcctcatccgtgaccagcagcttttccacaaggcgcgc
gagctgcttcccgagttgctgcacagaagggaagacgctactttgcagctgctcatggag
cacgtggcagaagcgacaggtcgcaacggcgtaacagacggcggtgacgcggcactggtc
tcccaagttgtcgccgcagaagctgatggcaccgcgccatcttcgccgtcgctggatgcg
ttgcagtacggctctgcacaggacccactctgcaccgagtccgtcatcagctgcctcgag
aagagcgatcggctgcacctgctgcgctatctaaacctcgtccaaaggcgttacccggag
gtgtttgctcaagcagcgaagcggcacgcccagctggtggcgacactttacatcgactac
gaccgcccctccctgctcccatttctcaagcagatgtccatgtacgtggagcgcattcgt
gagctgcacgcgctctgccacaaacaccacttcctcgaagaggagatctttctgctgttt
cgcatgggccgcgaggacgaggcgctgcgcatccttctggaaaggatgcacgacctccga
cgcgccttgaagtttgtcgtcaccgtccccgatctcgaggagcaggcggcgctgttcacg
cgacttgtcgactacaccgtcgcgtacaacgcgagcctgccaacgggcagcctcgacagc
gcaaataccgccacgggcggggctggggctcggatgcgctacgtgatgcaccacaccaaa
ccaaacgaaacgtatgcgtcaatcgcggagcagtaccatgttgcgctggaggacgtgtgc
aaggcgaatggcgtggcaggcgcgtccggcagcgctgtctcgccaccactgtctgccgcc
gtggaggcctcgaagaggtgcacgagttgcagctcacccttgcagggccaaggagaagcc
cagcggcgcgcatcctgcgatgcggacgcctcgaaagacctgccggctccaccgccacag
tgcgttgtgccgctcaacctcttcggcgacctcctcaggatccttgcagagccgccgttc
atggagcatcccgcgttggatgtgcgactcgttctgccgaagcttccgagccgtgagccc
atcctgcacgccgggcccagcattgctgccatcgcacacgccatggcggaggagattgcg
tttttctccaccgtatgcaaggttggcgagaatgacttgatgggctactatgggcagctg
ctgaagcgacgcacggcggccatcgcgatgggtcgacctcgccaccctgccgagagcggc
accaccgccatcaacgaggctgctactacgcccagacatgcggctgcggaattggcagag
ggctcatcggtggtgcaccgatgcgcagcttgccgccagctgcttgcgcagcgggtggtt
gtctttgcgtgtcagcacatgtaccacccggcctgtgtgctgcagtacctgaggaagtca
ccgacggacgccttcactggtgggggaggagcggcctttggtggccgcgctgggggcgcc
gtccccgtgatgcgcgacggcgctgcactggcgttgcctgtgacatccactgcggcggca
ggggcggagacgatggaggcgcagctccgcaaactgccagtttactgccgcgcgtgccgt
caacactcgggcgagcagagttga
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