Leishmania major: LMJF_31_2940
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Entry
LMJF_31_2940 CDS
T01014
Name
(RefSeq) putative squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lma
Leishmania major
Pathway
lma00100
Steroid biosynthesis
lma01100
Metabolic pathways
lma01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
LMJF_31_2940
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lma01006
]
LMJF_31_2940
Enzymes [BR:
lma01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
LMJF_31_2940
Prenyltransferases [BR:
lma01006
]
Terpene biosynthesis
Squalene/phytoene synthase
LMJF_31_2940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
5654232
NCBI-ProteinID:
XP_001685284
UniProt:
Q4Q5W4
LinkDB
All DBs
Position
31:complement(1384854..1386098)
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AA seq
414 aa
AA seq
DB search
MGFFSDSVAMMRVKWQMRSVKIQVPPEETDLRFCYDIMNDVSRSFAVVVAQLADQQLRDA
ICIFYLVLRALDTLEDDMSVPVDVKLKELPKFHTHTSDMSWCMSGVGEGRERELLAKYPC
VSREFKKLKKEYQDVIANICERMANGMCEFLKRPVVTKDDYNQYCHYVAGLVGHGLTQLF
ARCGFEDPSLDDDLTSSNHMGLFLQKTNIIRDYYEDIREEPPRMFWPKEIWGTYVTELKE
LKSESNNAAAVQCLNAMVADALVHVPYIVDYLSALRDPSVFRFCAIPQVMAIATLKEVYN
NPDTFQVKVKVSRPESCRIMLKATTLYSSLSMFRDYCVELQEKLDMQDASSVSIANSLAA
AIERIDLQLKKCQDVSYTRSLLARYPGLGGQFLLTVMDTVAGFFGGRKEIAGHA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggttcttctcggattcggtagcgatgatgcgtgtaaagtggcagatgcgctctgtg
aagattcaggtgccgccggaagagacggacttacgcttctgctacgatatcatgaacgac
gtctctcgttccttcgcggttgtcgtggcgcagctcgcagaccagcagctccgtgatgcc
atctgcatcttctaccttgtcctccgtgcgctggataccttggaggatgacatgagcgtt
ccggtagacgttaagctgaaggagcttccgaagttccacacgcacacgagcgacatgagc
tggtgcatgagcggcgtcggtgagggacgcgagcgcgaactgctggcgaaatacccgtgc
gtctcgcgcgaattcaagaagctgaagaaggagtatcaggacgtcatcgcaaatatctgc
gagcgcatggcaaacggcatgtgcgagttcttgaagcgcccagtggtcacaaaggacgac
tacaaccagtactgccactatgtcgccggcctcgtcggccacggcctcacccagctcttc
gcccgctgcggcttcgaggacccgagcctggacgacgatctcaccagttccaaccacatg
ggtctcttcctgcagaagacaaacatcatccgcgactactacgaggacatccgagaggag
ccgccgcggatgttctggccgaaggagatctggggcacgtacgtgacggagctgaaggag
ctgaaaagtgagtcgaacaatgcggcagcggtgcagtgcctgaacgccatggtggccgac
gctctcgtgcatgtcccctacatcgtggactacctctccgctctgcgcgacccgtccgtg
ttccgcttttgcgccattcctcaggtgatggccattgcgacgctgaaagaggtgtacaac
aaccccgacacgttccaggtcaaggtgaaggtgtcacggccggagtcgtgccgtatcatg
ctcaaggccacgaccctctacagctccctcagcatgttccgcgactactgcgtggagctg
caggagaagctagacatgcaagacgccagctccgtatcgatcgccaactcgcttgcggcg
gcgattgagcggatcgacctgcagctgaagaagtgccaggacgtctcctacacccgcagc
ctcctcgcccgctacccaggcctcggtggtcagttccttctcaccgtcatggataccgtc
gctggtttctttggtggccgcaaggagattgccggccacgcgtaa
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