Leishmania major: LMJF_32_0310
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Entry
LMJF_32_0310 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K19672
intraflagellar transport protein 140
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lma03037
]
LMJF_32_0310
Cilium and associated proteins [BR:
lma03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
LMJF_32_0310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_2nd
Beta-prop_IFT140_1st
TPR_IF140_C
WD40_CDC20-Fz
TPR_COPA_B
TPR_19
WD40_WDHD1_1st
TPR_GEMI5
Nucleoporin_N
Beta-prop_HPS5
ANAPC4_WD40
DUF1199
Motif
Other DBs
NCBI-GeneID:
5656140
NCBI-ProteinID:
XP_001685344
UniProt:
Q4Q5Q4
LinkDB
All DBs
Position
32:complement(109241..114208)
Genome browser
AA seq
1655 aa
AA seq
DB search
MSLFVVNTPEHEGQLKEHLIAAHKRKPLLATAWVNPPSVLITNSEGEVLTPVTGPAGSTG
RTHQPTALTWHPSEALLVIGWGNGEMSLWSMPSVSSLALGEDYTAAAARSAVQLIAARAA
TQSDADGAVREHGAGAVLAAEWSTRGLYLVSASQQRQVVMWMLEQTPTETSVDFKLKPLW
SVQAREPVVRIIHVPGKAARSPTAFHACDGASAAAAAEDGDDDISFLLADGSSSVAAINE
DQQLFPCVRQQEVIVSVLYDATSRTLVTLTTTCMIEVYRVGEDIKGSSTLRRKLSAPSTT
ATTSAATGERITMSMVWASPGVVAFGSGDDRVRVFDLSSESMDVLLLPQPDLHVSSLATF
AAKGILTVGTVEGVLAVFQHRAASLSTNRHASEAKETTTISSPFAAAAGVASQWEATAVH
QVGKCVDRVVYTAFGDVALCRGGSELQVLHEIIRKRSWDGVAAVTQISSDMVVIESVTGC
QCLLQNKGNVRGLSIAFPNIALWNGSQIDLYTINETTSEFTFVNFVLTTSPAFAIHRDGL
IYVKGNRIVFETMQLAPIAQMTFTESEGIPVIIDIMNDYLVAVSSKNYLRLARVSSRDLQ
QAGPARPLAFPSAAQPTASDTASDAPAAAPSSVNDTNALEVSVSTARVNAQGRRVALMTS
LGPLALPDTRIWVYDSDTDKMSSFDFGSRNEMPNSVYWNTPEPNTSTVGEFEYILLACET
YQIHMDDKKAASEEVTTPKAGTGGINDKNESADRPAGQENLPEALPNVENYAEKKAELED
ARRGSIVATNYVAQRAHNIVTLFATHDGLVVQNVASMRRYQICLVGLTIPDFLLASVKIN
GNPSNAEDYVIEQKRLRDFEGLKSEKDVAVREALMKFSYYATIGNMDEAYRCVKSIRNPA
AWQGLARLCVTSGRLDVAAVCLSTMEDCVAARALREAREDYPDDKDVQLATLALGLGMTE
EAEELLRKSKHYDLLTDVYMACGKFEHAQRHSERFDRARIRPVAYKYAQFMESLQNMDAA
IMWYYNAKCAGTDVPRIFFQTNRMHELRQLMVTQSQPPSPSAGASAPTAQPGRDERQPAF
AAIFPQNRELLLWWAQHSERRRNVQEALRFYHTGEDVYNIVRILCSLTPPKLDSAVQLVN
KEIEKAKTRFQQQQAFAAAAPVHCGGDDQGEPDPVGAAYFVGQLYERQGNAQLALQYYQA
AGAYRSGVRVAWKTEQYGVVVNLAIKSSDERLMLETAMTLEKQQTYDKAVQLYRRIGAVQ
CALDACVRGGLYETLHEVSATFASGSTDPAVFLGMADHFQSEGDYQKAVEMLLFAKHFDE
ALKLCETRSVTLTEEMAESMTSDMGKLSMDERQAVLRRVAHIAKDQGSWSLACKKYTQAG
DRVKAMRMLMRGGETEKVIFFANHSRNVEIYTMAANFLQSQKWSTDASIYKSIILFYTKA
KAWTNLLVFYESCAQLHIDENRNYPGALRALEECIAMAESGSAGKANIDREKVEQLKRRA
EVLQAFVKAQKTVDSMVVADRGSVAEKAKADSVIASCSDIIKRSRPSSPDHDLIQDALRI
GDVFALMVRFYFDKLGESNNALKVMESMSKHGADPQFFIETDYMERVCQANGKSLANVLP
GVMMAGAPGAGWEGARKASTDTRRSSVIDEVDRAV
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttttcgtggtaaacactcccgaacatgaggggcagctgaaggagcacctcatc
gcggcgcacaagcgcaagccgctcctcgccaccgcgtgggtgaatccgccgtcagtgctc
atcacgaacagtgaaggtgaggtgctgaccccggtgacggggcctgccggctcgacggga
cgcacgcatcagccaacggcattgacgtggcaccccagcgaggcgcttctcgtgattggc
tggggcaacggggagatgagcttgtggtcgatgccgtcggtgagcagtcttgccttgggt
gaggactacaccgcggcagccgcacgcagcgctgtccagttgattgcggcgagggcggct
acgcagagtgacgcggatggcgctgttcgcgaacacggcgccggcgcagtcttagccgcg
gagtggtcgacgcgtggactgtacctcgtctctgcatcacagcagcgccaggtggtgatg
tggatgctggagcagacccccaccgagacgagcgtcgactttaagctgaagcccctgtgg
tccgttcaggcgcgtgagccagttgtgcgcatcattcacgtccccggcaaggccgctcgc
tctccgacagcgttccatgcgtgcgatggcgcctccgctgccgctgctgcggaggacggc
gatgacgacatcagcttccttcttgccgacggcagcagctctgtggcggccatcaacgag
gatcaacaactttttccgtgtgtaagacagcaggaggtaattgtgtcggtgctttacgac
gccacaagccgcactctcgttacgcttaccacaacctgcatgattgaggtatatcgtgta
ggcgaagacatcaagggtagctcgacgctgcggcgcaagttatcggctccttccaccacg
gccaccacgtctgccgcgacgggcgagaggattaccatgtccatggtgtgggcgtcgcct
ggtgtcgtggcctttggcagcggcgatgatcgcgtgcgcgtctttgacctatcgagtgag
tcgatggatgtgctgttgcttccgcagcctgacctgcacgtgtcgtccttggcaaccttc
gccgccaaaggcatcttgactgtcggtaccgtggagggcgtcctggcggtgtttcagcac
cgtgccgcgtccctgtcgacaaaccgtcatgcttcagaggcgaaggaaacaacgaccatc
agctcccctttcgctgcggctgccggggtggcgagtcagtgggaggcgacagcggtgcac
caagttggcaagtgcgtcgaccgagtcgtctacacagcttttggcgatgtcgcgttgtgt
cgtggtggatcggagctgcaggtattgcacgagattatccgcaagcgctcctgggacggc
gtcgcggcggtgacgcagatttcgtccgacatggtagtgatcgagagtgtcacggggtgc
cagtgcctgctgcagaataaggggaacgtgcgcgggctgtccatcgcgttccccaacatt
gctctttggaacgggtcgcagatcgacctatacaccatcaacgagaccacgtccgaattc
acgttcgtgaactttgtgctgacgacgagccccgcctttgccatacaccgtgacggcctc
atctacgtcaagggcaatcgtattgtgttcgagacgatgcagctcgcccccatcgcacag
atgacttttaccgagtccgaaggcatcccagttatcatagacatcatgaacgactacctc
gtggcggtgtcgtcaaagaactacctgcggctcgcccgggtttcgtcgcgcgatttacag
caagctgggccagctcgcccgctggcgtttcccagcgcagcacagccaactgcctcggat
actgctagtgacgcaccagcagcggcgccatcttccgtcaacgacaccaatgcgctcgaa
gtgtcggtctccacggcgcgtgtgaacgcgcaaggccgtcgagtcgccttgatgaccagc
ctgggccccctcgcgctgcctgatacgcgcatctgggtgtacgactccgacactgacaag
atgtcgtcctttgacttcggcagccgcaacgagatgccaaactccgtctactggaacaca
ccagagccgaacacgagcaccgtcggcgagttcgagtacatcctgcttgcctgcgagaca
tatcagatccacatggatgacaagaaggcggcatcggaggaggtgacgacgccaaaggcc
ggcacgggcggcatcaacgacaagaacgagagcgccgatcgccccgctgggcaggagaat
cttcccgaggcgttgccgaacgtggagaactacgcggagaagaaggccgagctggaggac
gcgcgtcgcgggtccattgtcgccacaaactacgttgcccagcgcgcgcacaacatcgtc
acgttgtttgcgacgcacgacgggctggtcgtgcaaaacgttgcgtcgatgcgacgctat
caaatttgtctggtaggcctcaccatccccgacttcctgctcgcctctgtgaagatcaac
ggcaacccgagcaacgcggaggactacgtgattgagcagaagcggttgcgcgactttgag
ggcctaaagtcagagaaggacgtggccgtgcgggaagcgttgatgaaatttagctactac
gcaaccatcggcaacatggatgaggcgtaccggtgcgtcaagagcatcaggaacccagcg
gcgtggcaagggctggctcgcctgtgcgtgacgagcggtcgccttgacgtggcggcggtg
tgcttgtctacgatggaggactgcgtggccgcacgtgccttgcgggaggccagagaggac
tacccagacgacaaagacgtgcaactggcgacgcttgcgctcggcctgggcatgaccgag
gaggcggaggagctactgcgcaagtcgaaacactatgacctgctgaccgatgtgtacatg
gcgtgcggcaagtttgagcacgcccagcgtcattctgagcggtttgaccgcgcccgcatt
cgcccggttgcgtacaagtacgcgcagtttatggagagccttcagaacatggatgccgcc
atcatgtggtactacaacgccaagtgcgccggtaccgatgtgccacgcatcttcttccag
acaaaccgcatgcacgagctccgccagctgatggtgacacagagccagccgccatcgccg
tcggccggcgccagcgcgccgacggcccagccagggcgcgatgagcgacagcccgccttt
gccgccatctttccacaaaatcgcgagctgcttctgtggtgggcgcagcacagcgagcgg
cgccgcaatgtgcaggaggcgctgcgcttctaccacaccggcgaggatgtctacaacatt
gttcgaattctctgctcactgacgccgccaaagctggacagtgcagtgcagctggtgaat
aaggagatcgaaaaggcgaagacgcgctttcagcagcagcaagcctttgccgccgcagcg
ccggtccactgcggaggcgacgaccaaggagagcctgatccagtgggtgccgcgtacttt
gtagggcagctgtacgagcgacaaggcaacgctcagctggcgctgcagtactaccaggct
gccggcgcataccgtagtggtgttcgcgtcgcgtggaagacggagcagtacggcgtcgta
gtgaacctggcgataaagagctctgacgagcgcctcatgctcgagacggcgatgactctg
gagaagcagcagacgtacgacaaggccgtgcaactgtaccgccgcatcggcgccgtccag
tgcgccctcgacgcctgcgtgcggggcggtctgtacgagaccttgcacgaagtgagcgcc
acctttgccagcggctccaccgacccggcggtcttccttggcatggcggaccacttccag
agcgagggcgactaccagaaagcagtggagatgctcctcttcgcgaagcatttcgatgaa
gcgctgaaactgtgcgagacgcgcagtgtcaccctgacagaggagatggcagagtccatg
acgagcgacatgggcaagctgtccatggacgagaggcaggcggtgcttcgcagggtggcc
cacattgccaaggatcaaggcagctggtccttggcgtgcaaaaagtatactcaggcgggt
gatcgcgtcaaggcaatgcggatgctcatgcgtggtggtgagacagagaaggtcatcttc
ttcgcaaaccactcgcgcaacgtggaaatctacaccatggcggcgaacttcctgcaatcg
cagaagtggagcaccgacgcgagcatctacaagagcatcattctcttctacacaaaggcg
aaagcatggacgaatctgctcgttttctatgagtcgtgcgcgcagctgcacatcgacgag
aaccgaaactaccccggggcgctgcgtgcgctggaggaatgcatcgccatggccgaaagc
gggtcagcgggcaaggcgaatatcgaccgcgagaaggtggagcagctgaagcggcgcgcc
gaggtgctgcaggcgttcgtgaaggcgcagaagacggtcgactccatggtggtcgccgac
cgtggctctgtcgcggagaaggcgaaggcggacagcgtcattgcctcctgctctgacatt
atcaaacgcagccgcccttccagtccagatcacgatctcatccaagacgccctccgcatt
ggtgacgtgtttgctctcatggtgcgcttttactttgacaagctcggtgagtcgaacaac
gcgctgaaggtgatggagagcatgtcgaaacacggtgccgatcctcagttcttcattgag
acagactacatggagcgggtctgccaggccaacggcaagtcgctggctaacgtgttgcct
ggcgtcatgatggccggtgcccctggggcagggtgggaaggagctcgaaaggcgagcacc
gacacacgacgctccagcgtgattgatgaagtagaccgagccgtctag
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