Leishmania major: LMJF_32_0570
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Entry
LMJF_32_0570 CDS
T01014
Name
(RefSeq) putative RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lma03009
]
LMJF_32_0570
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMJF_32_0570
Ribosome biogenesis [BR:
lma03009
]
Eukaryotic type
90S particles
Helicases
LMJF_32_0570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
5656168
NCBI-ProteinID:
XP_001685372
UniProt:
Q4Q5M6
LinkDB
All DBs
Position
32:201263..203005
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AA seq
580 aa
AA seq
DB search
MDAFRSLTIGTKFSAARNEEAAKLFRNAGKDKGSHGFPDAIGADGAVTLENASDMGSSSL
SVPPPSATLNLFGRPTRSHADANAHLGVSAGSDAAAAANTASENKALKAITFKKKRNIWR
RNDLQVTGTDLPAPIEHFSDLVRPPLNVPRNVVNNLFARQHKVPTPIQMQAISSLIHHRD
VLACAPTGSGKTIAFLVPLFALLKAPDASCGVRALIVTPTAELAQQIEREAFFLMKGQRW
KFVQHGQTTKKKDIFIATPGRILSLLEQKLLDLSNVQYLVFDEGDRLWDSRTDFLTVIDR
ILTACTRTDKVVSLFTATLSEKVEAAARSVMGADPVRIIVHGRRSANTHVKQRLVFCGNE
LGKVVAMRNLVREGITPPVLVFVQSVERSKELYEEIRMEGLHMAIMHAKMTVEQREETVL
QFRLGKIWVLVTTELLARGIDFKNVGTVINFDFPATVDSYIHRVGRTGRAGKEGTAITFF
TEDDKERLPPIAKVMQDSGNAVEDWILGIKVDRSTRRRLERTTPQRTIVSTRKRMLVAQQ
RVQRQYRRLEAEKAAKQASKRSKGCGDCDRDDGDDSTDDA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttccggtcgttgacgatcggcaccaagttcagcgctgcccgaaacgaggag
gcggccaagttgttccgcaacgcgggcaaggacaagggcagccacggatttcctgacgct
atcggcgctgatggagcggttacccttgagaacgcatcggacatgggcagcagcagcctg
tcagtgccgcctcccagtgcgacgctgaaccttttcggacgccccacaaggagtcacgct
gacgcaaacgcgcacctcggcgtatcagcgggctcggatgctgcggctgccgccaacacc
gcctccgagaacaaggcgctaaaggcaataaccttcaagaagaagcgcaacatctggcgc
cgcaacgatctgcaggtgacgggcacggacttgccggcaccgatcgagcacttctccgac
ctcgtgcgcccaccgctaaacgtgccgcgcaatgtagtgaacaatctcttcgcccgtcag
cacaaggtgcccactccaatccagatgcaagcgatctcatccctcatccaccaccgcgac
gtgcttgcctgtgcaccgaccggatccggcaagacgattgcttttcttgtccctcttttt
gcgctgctcaaggcaccggatgcgtcctgcggtgtgcgtgccctcattgtgacgcccacc
gccgagcttgcccagcagatcgagcgcgaggcattcttcttgatgaagggtcagcgatgg
aaatttgtgcagcatggccagacgaccaagaaaaaggacattttcattgctaccccgggc
cgtattctgtcgctgctcgagcagaagctactagacttgagcaacgtgcagtatctcgtg
ttcgacgagggcgatcgcttgtgggacagcaggacggacttcttgactgtgattgacagg
attctcactgcatgtacgcgcaccgacaaggtagtcagcctgtttacggccacgctgagc
gagaaggtggaggcagctgcccgctccgtcatgggtgccgacccggtgcgcatcattgtc
catggccgacgctccgcgaacacgcacgtgaaacagcgattggtcttctgcggtaatgag
ctgggcaaagtcgtagcgatgcgcaaccttgtgcgggagggcatcacgccgccggtgctc
gtgttcgtgcagagcgtggagcgatcgaaggagctgtacgaggagatccggatggaaggc
ctgcacatggccatcatgcacgccaagatgaccgtggagcagcgcgaggagacggtgctg
cagttccgtctcggcaagatctgggtccttgtgacgacggagctgcttgcgcgcggtatc
gacttcaagaacgtgggcacggtcatcaacttcgattttccagcaactgtcgactcgtac
atccaccgcgtgggtcgcacgggccgcgccgggaaggagggaacggcgatcacttttttt
acggaggacgacaaggagcgacttcctccgatcgcaaaggtgatgcaggactctgggaac
gccgtggaggattggatactgggcatcaaggtggatcgcagcacccgccgccgtcttgag
cgcacaacgccgcagcgcaccattgtcagcacgcggaagcgcatgctggtggcccagcag
cgtgtgcagcgtcagtaccgtcgtctggaggcggagaaggcagcgaagcaagcctccaag
aggagcaagggctgcggggactgcgaccgcgacgacggcgatgacagcacggatgatgcg
tag
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