Leishmania major: LMJF_32_0715
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Entry
LMJF_32_0715 CDS
T01014
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4p
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
lma
Leishmania major
Pathway
lma03018
RNA degradation
lma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMJF_32_0715
09123 Folding, sorting and degradation
03018 RNA degradation
LMJF_32_0715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_32_0715
03041 Spliceosome [BR:
lma03041
]
LMJF_32_0715
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMJF_32_0715
mRNA degradation factors
5'-3' decay
Lsm complex
LMJF_32_0715
Spliceosome [BR:
lma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LMJF_32_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5656183
NCBI-ProteinID:
XP_001685387
UniProt:
Q4Q5L1
LinkDB
All DBs
Position
32:249062..249631
Genome browser
AA seq
189 aa
AA seq
DB search
MHPFKRLSWTHLFFKPFWSSPRISCASIVTCTHQSFSSPCTRACKHTSRRQEVPSTGNSV
FIVHTLSLKQTFRMSFARRPITPIEILRNCRGKEVSIELADGETVNGTVMRTDRAMNVVI
KQCTRTGADGESFWKSRECFIRGASVKNVRMTDSALVAVPVLSKRKAAGSKGADTRKEKS
VAGGKRPRR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcacccatttaaacgcctgtcttggactcacttgttttttaaacccttctggtcttct
ccgcggatctcttgcgcctctattgtgacttgcactcaccaatccttctcctctccctgc
acacgcgcatgcaagcacacttccaggcggcaagaggtgccctccacaggaaattctgtt
tttatcgtgcacactctctccctcaaacagacgttcagaatgagcttcgcacgccggcca
atcactcccatcgagatcttgcgtaactgccgcggcaaggaggtctccatcgagcttgcg
gacggtgagacggtgaacggcaccgtcatgcgcacggatcgtgccatgaacgtggtaatc
aagcagtgcactcgcactggcgctgacggcgagtcgttttggaagtcacgtgagtgtttc
atccgtggcgccagcgttaaaaacgtgcgtatgacggacagcgcacttgtcgccgtgccg
gtgttatcgaagcgtaaggcggcgggcagcaaaggcgccgatacccgcaaggagaagtcg
gtagcaggtggcaagcggccacggaggtag
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