Leishmania major: LMJF_32_0720
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Entry
LMJF_32_0720 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lma
Leishmania major
Pathway
lma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMJF_32_0720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_32_0720
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMJF_32_0720
mRNA degradation factors
3'-5' decay
Pan complex
LMJF_32_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
DUF7589
Motif
Other DBs
NCBI-GeneID:
5656184
NCBI-ProteinID:
XP_001685388
UniProt:
Q4Q5L0
LinkDB
All DBs
Position
32:251421..252866
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AA seq
481 aa
AA seq
DB search
MNPVTGSIPGVANGAQMMSPTFPSPHSLYSPQHHMDVYRTNGNLSLAADPFPVTPYTPIS
SLFMSPSVRNSLTTPHSVRPRRPVTHVTSSKFSMYTTIYNLEPEPKPSVMMPKVRMQVYQ
TSARYTGKDILLRRLVNVPVKEEECAAVKEALRQYRHPNLVPLTNLFATEEFVMGSTDVI
MEYRYMSGAKSLQEAFFTEGRRATEGLLWSFTCQLVGLLRSFHETLIPLHGLHWSKIIYV
ETTGRFYFTGLGLTDLLEPRGTTVQQHILMKQDIQALGFILFQLASRNLNVKLETFTNKQ
PLPGFSQSFWELIKTCLEGHADSAQLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGR
VMRLLIKLSFALESPAEVHEYTSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNK
LDIGSDETIQLIGTDTSNTVLVVSYADLRAMLDSVFDRVQQVSQMTTDVDPQRYTMTPGS
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgtcactggaagcattccgggagtcgcgaatggcgcgcagatgatgtcgccg
acgtttccgtcgccccatagcctatacagcccgcagcaccacatggatgtgtaccgcacg
aacggcaacctttctttggcggcagacccgttccccgtgacgccgtacacccccatcagt
agtctcttcatgtctccctccgtgcgcaactcgctgaccaccccgcactcggtgcggccg
cgtcgcccggtcacacacgtcacgtcatcgaagttctccatgtacaccaccatctacaac
ctggaaccggagccgaagccaagcgtgatgatgcccaaggtgcgcatgcaggtataccag
acgagtgcgcggtacaccggcaaggacattcttctgcgacggcttgtgaacgttccggtg
aaggaggaggagtgtgcggcggtgaaagaggcactgcggcagtatcggcaccccaacctg
gtgccactgacgaacctcttcgccacggaggagttcgtgatgggcagcactgacgtgatc
atggagtaccgctacatgtccggggcaaagagtttgcaggaggccttctttacagaggga
cgccgcgcaacggaggggctgctgtggtccttcacatgtcagctcgtcggccttctccgc
tccttccacgagacccttatcccgttgcacggcttgcactggtcaaaaatcatctacgtc
gagacgaccgggcgattctacttcaccggcttgggactgacagacctgctagaaccgcgc
ggcacgacggtgcagcagcacatcctcatgaagcaagacattcaagccctcggctttatc
ctcttccagctcgcctctcgtaacctcaatgtcaagctggagaccttcacgaacaagcag
ccgctgcccggcttctcacagagcttttgggagctcatcaagacatgcctggaggggcac
gccgactctgcgcagctgtgccacgctctcggtgagcggatgtcgatggaggtgggccac
caggaggggcacacggactttctaatgtctcagtgccaaaaggagatgcacaacggccgt
gtgatgcgcctgctcatcaagctcagctttgctctagagtcgccggcggaagtgcacgag
tacacgtcggagaatcagcgctacgttctgcgcctctttaaccagttcctcttcaaccag
gtggatgagcagaaccgagtgaacgtggactggggccacgtgtaccactgcctgaacaag
ctggacatcggctctgacgagacgatccagctgatcggcacggacaccagcaacaccgtg
ctcgtggtgagctacgctgacttgcgtgccatgctggacagcgttttcgatcgtgtgcag
caggtgtcgcagatgacgacggacgtcgaccctcagcggtacaccatgacacctggtagc
atatag
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