Leishmania major: LMJF_32_0770
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Entry
LMJF_32_0770 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lma04131
]
LMJF_32_0770
Membrane trafficking [BR:
lma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
LMJF_32_0770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
5656189
NCBI-ProteinID:
XP_001685393
UniProt:
Q4Q5K5
LinkDB
All DBs
Position
32:264566..269497
Genome browser
AA seq
1643 aa
AA seq
DB search
MQLCSGTVSVHCREDVCQDGESVQFMAVNTSGTILAVLTQLRIQFWSAGPKVVYLTSLAV
PGTSLEDNPAMYALWRQRPGNHLAVVTARHVVFFEADINLRTPDFLQAIERNRHVVYLQH
VDSASRVCYSSDVPLVTGLVTSAAAAGPYAFLVTTTAGVVYVLGWHQQDILHQWTIVGLQ
GGGHTFRCATKDEACDFMTAAGCPDVLAAPDKAPGNSSLSSPAVRSTKPLTSPQSRVDPL
QRRYRQDLPVSSSDAVGDSTTSTAAAASAPAAVQPPGTAVRAHATQFRSNDTTTASPPLP
DGEATNTAAPPEKDKDTEGLAADAHSICASATMGTRPQKPWQPSSLLPSSSPTDCAAARS
SAGAELLSGTILHASFASRMKVLTFVFSSGSVLLCRPSCGTNFTHQKVQLQGFVTPIVSA
CMVAINVRHLLLAVCTQAGALSCRRIDSTSLAVHPSPLWKGLRGVSDAVSKYSCGVPPAS
QSLGLIAGMEWSPSEELLCVAFYKHGIALVHYSGGVVARHLSGPASATLLRTPPVPPIDS
QWPPDDAAALIGENAQASSLRNEQEKEAVLGCSAISWKPDGTRLWMAAPRQPCFFSTQLS
RVLTVDTVGPTSGNHTPLALLADNALYLVSVSEATAAQGVREMVLLPDDYLRDQYPLLHG
AVSSDGSWMTCAGRRGLVLFNRERYSWKLASKEEEESFSCVADPVWLRDVAVAVPALRTD
SKTFELIVFSTSSVSPSHASARVALDGRPTQLSCLHQDHRGEGYVVAVDCNQMVRVFRYD
VFTDVATERSSATPYVALTPVQQLALPSELSNPLRVIPVCLRGEEGDRESPQRTEDHMEL
RLLLHKRSDHTLVWVRGERCAAGDAGCGCASSAGSWPSLNAVVEPVDLANRCFVFRCWVD
RTAPTRGAVVLAHEEEQGLVMYQLHLSGLRPNATVAPVAHRMKVAATRDSELLPLCPSPF
DGYMLCVATDMSAPRPSRRRSATGVIGGVSQASPRPQLALRPILYAHRILSLLLLAAMPS
SPASHRVSNAPEASASLPSLISSAPPRLEGCATASAANASSTSSCRAAEVDGCVATFMWD
RSLFYWLEHMRLNDTFTAVLDYFLHTALNESPPAAVPGLGRYSAVRAAISLLRNYPEFYA
IVVGCVRKIDFARWHLVMDFLGTPTDLFHECVAHHCYAEAVHLVRVIMMGTYKPAATLPV
DRTAELGSGGRSGSDVTRLQQASQCAVELFVLSVENGSYTAAYDIMRFMALLEEEIGMPA
AGGLDLHGGSGGGAGGSAASSVDFLTWWLRQLTFSGSARYDGEAAVEEPSGKKKASTGAS
SGDVTKTHSVEGFPALVFDVTRCDPVQSGRTAEEAAEETQRQAAVHHMFRRHGALPDAVH
REALRLLRTGYVTQLAKLMDTFSFSVAEFLQAVRPVLVEAAAADTNDAADGGVGCDRVTA
CLHDIFDGLHKELGLPRSFAANVSPTASTTWSAWLVEKQTAQAAALPGVLSSTNPKVWTV
VQSALYASPSLLSSVESLHQLFAPVFVDNLAFCVLLMRKSNLISLLLSHEAPACASAGRP
EHVSTDSMTQSGVSPTKLIDVLGQLDALLAVPENAGYRPFLQDIFTSLPPSVLHAIAPPV
ASRASGVAAASPEVDANSTGAAE
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtgcagtggcaccgtgagcgtgcactgccgcgaggacgtctgccaagatggc
gagtccgtgcagttcatggcggtcaacaccagtggcaccattttggcggtgctcacgcag
ctccgtatccagttctggagtgcggggcctaaggtggtctatctgacctcactcgcggtg
cctggcacctcactcgaagataatccggccatgtatgcgctgtggcgtcaacgaccgggt
aaccacctcgccgtcgttaccgctcgccatgttgtgttttttgaggccgacatcaacctc
aggacgcccgatttcctccaggcgatcgagagaaatcgacacgtggtgtacctgcagcac
gtcgactcggcgtcgcgcgtgtgctactcgagcgacgtgccgctcgtgacgggactcgtc
acatccgccgccgccgccggcccctacgccttcctcgtgacaaccacggcgggtgtcgtc
tacgtactggggtggcaccagcaagacattctccatcagtggaccattgttgggctgcag
ggaggcggccacacctttcggtgtgccacaaaagacgaagcgtgcgacttcatgactgca
gcaggctgccctgacgtgctcgccgcaccggacaaggccccgggcaactcgtccctgtca
tcaccggcagtgaggtcgaccaagccgttgacgtcgccgcagtcgcgcgtggaccccctg
cagcggcggtaccggcaagacctacctgtatcttcttcagacgctgtcggtgactccacg
acgagcacagctgcagcggcgtcagcacccgctgccgttcagcctccgggcaccgccgta
cgagcccatgcgacgcagttccgctcgaacgacaccaccacggcctcgccgccgttgcca
gacggcgaggcgacgaacaccgcggcgccacccgagaaggacaaggatacagaggggctg
gctgccgatgcgcacagcatctgtgccagtgccaccatgggcacaagaccgcagaagccg
tggcagccaagctccttgctgccttcctcttcgcccactgactgcgccgccgcccgcagc
agtgccggggcggagttgttgtccggcaccatcctgcacgcctcctttgcctctcgcatg
aaggtgctgaccttcgtcttcagtagcggcagcgtgctgctgtgccggccctcctgcggc
acgaacttcacgcaccagaaggttcagctgcaaggtttcgtgacgccaatcgtgtctgcg
tgcatggtggccatcaacgtgcgccacctcctgttggcggtgtgcacccaggcgggcgcg
ctctcgtgccggcgcatcgatagcacgtccttggcggtgcatccaagccctctgtggaag
ggccttcgcggtgtcagcgatgctgtctccaagtattcttgtggcgtcccgcccgcctcg
cagtcgcttggcttgattgccgggatggagtggtcgccgtctgaggagctgctctgtgtg
gccttctacaagcacggtatcgccctcgtgcactacagtggcggtgtcgttgcccgccac
ctgtcggggcccgctagcgccactctcctgcgcactccaccagtgcctccgattgactct
cagtggccccctgatgatgcggcggctctgataggcgagaacgcgcaggcgtcatcgctg
cgcaacgagcaggaaaaggaggcagtgcttggctgctctgccatttcgtggaagccggac
ggaacgcggctgtggatggcagcccctcgccagccgtgcttcttctcgacacaactgtct
cgtgtgctgaccgtggacacggtcggacctaccagcggcaaccacactccgcttgccctg
ctcgctgacaatgctctttacctggtctccgtgtccgaggcgaccgctgctcagggcgtg
cgtgagatggtgctgctaccggacgactatctgcgcgaccagtacccactcttgcacggt
gctgtgtcgagcgacgggagctggatgacctgcgccggccgccgcggcctcgtcctcttc
aaccgggagcgctactcgtggaagctggcctcgaaagaggaggaggagtcgttcagctgc
gtagcggaccccgtatggctgcgcgacgtcgccgtggcagtcccggcacttcggaccgac
tcgaaaacctttgagctgattgtgttttctacgtcgagcgtgtcaccgtcgcacgcctcg
gcacgcgtggcactcgatggcagaccgactcagctttcctgccttcaccaggatcacaga
ggggagggctacgtggtggccgtggactgtaaccagatggtgcgcgtcttccggtacgac
gtcttcacggacgttgccacagaacggtcttcagcgacgccgtacgttgccctcacgccg
gtgcagcagctggctctccccagcgagctctcgaaccctctgagagtcattccggtgtgc
ctgcgcggcgaggagggcgaccgcgagtcaccgcagcgcactgaagaccacatggagctg
cgcctgctgctgcacaaacgcagcgaccacacccttgtctgggtcagaggggagcgatgc
gcggctggcgatgctggctgcggctgcgcttcatcagctggcagctggccgtctctcaac
gccgtcgtggagccggtggacttggcgaacaggtgttttgtgtttcggtgctgggtggac
cgcacagcaccaacacgtggggcggtggtgctggctcacgaggaggaacaagggctcgtg
atgtaccagctgcacctgtccgggctccgcccaaacgcaacggtggctcctgttgctcac
cgcatgaaggtggcggcgacgcgggactcggagctgctgccgctctgcccctccccattt
gacgggtacatgctctgcgtcgcgacggacatgtcggcgccgcgaccgagccgtcgacgc
agcgccaccggcgtaattggcggcgtaagccaagccagcccgcgaccgcaactggcgctg
cgccccatcctgtacgcccaccgcatcttgtcgctgctgcttctggcggcgatgccgagc
agcccggcgtcgcatcgagtttccaatgcaccggaggccagcgcgtctttgcccagtctt
atatcatcggcaccgcccaggttagagggatgtgctaccgcttctgcagcaaatgcatcc
tcgacctcatcgtgccgtgctgccgaggtcgacggctgtgttgccacctttatgtgggac
cgcagcttgttctactggctggaacacatgcggctgaacgacaccttcacggcggtgctt
gactacttcctccacacggcgctcaacgagtcacctccggcggcagttccaggactgggc
cgatacagcgccgtgagggccgccatctctctccttcgcaactaccccgagttttatgcg
atcgtggtagggtgcgtgcgcaagatcgactttgcgcgctggcaccttgtgatggacttc
cttggaacgccgacggacctgttccacgagtgcgtcgcccatcactgctacgcggaggct
gtgcatctggttcgggtgatcatgatggggacctacaagccagcggcgacgctgcctgtc
gatcgcacggccgagttgggcagcggcggccgctccgggagcgacgttacacggctgcag
caggccagccagtgtgccgtggagctcttcgttctgtccgtggaaaacggaagttacacc
gcggcctacgatatcatgcgcttcatggcacttctggaggaggagattggcatgcctgcc
gccggcggcctcgaccttcacggcggcagtggcggtggcgcaggcgggtcagcggcctct
tctgtcgacttcttgacgtggtggcttcggcagctcacgttcagcggttctgcgcgctac
gatggagaggcggccgtggaggagccgtctggaaagaagaaagcctcgaccggcgcatcg
agcggcgacgtcacgaagacccactcggtcgaggggttccctgccctggtgttcgacgtc
acccgctgcgaccctgtgcagagcgggcgcacggccgaggaggcggccgaggagacgcag
cgccaggccgccgtgcatcacatgtttcggcggcatggtgcgctgcctgacgcggtgcat
cgggaagcactgcggctgctgcgcaccgggtacgtgacacagctagccaagctcatggat
accttttccttctcggtcgcggagttcctgcaggctgtgcgccccgtcctcgtcgaggct
gctgcggctgacaccaacgatgctgcggatggaggggtcgggtgcgaccgcgtcacggcc
tgcctgcacgacatctttgacggccttcacaaagagctcggcttgcctcgcagttttgcg
gcgaacgtcagcccgacagcgagcacgacgtggagtgcatggctagtggagaagcagacg
gcacaggctgccgcgctgcctggcgtgctgagtagcacgaacccgaaggtgtggacggtg
gtacagtccgcgctgtacgcctcgccaagtcttctcagctccgtagagtcgctgcaccag
ctcttcgcccccgtctttgttgacaatttggccttttgtgtgctgctgatgcgcaagtcg
aacctcatttcactgcttctgtcgcatgaggcgccagcatgtgcatccgcggggaggccg
gagcacgtctcgacagattccatgacgcaaagcggtgtttctccaacaaagctcatcgac
gttctcggacagctcgacgcgctcttggcagtgccggagaacgcggggtacaggcctttt
ctgcaagacatcttcacctcactgccgccctccgtcttgcacgccattgcgccaccagtg
gcctctcgtgctagtggtgtcgccgccgcctcccctgaagttgatgcaaattcgaccggc
gcggcggagtag
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