Leishmania major: LMJF_32_1280
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Entry
LMJF_32_1280 CDS
T01014
Name
(RefSeq) putative RNA polymerase-like protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lma
Leishmania major
Pathway
lma03020
RNA polymerase
lma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMJF_32_1280
09124 Replication and repair
03420 Nucleotide excision repair
LMJF_32_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lma03021
]
LMJF_32_1280
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_32_1280
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_32_1280
Transcription machinery [BR:
lma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
LMJF_32_1280
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMJF_32_1280
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LMJF_32_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
5656241
NCBI-ProteinID:
XP_001685444
UniProt:
Q4Q5F4
LinkDB
All DBs
Position
32:499776..500375
Genome browser
AA seq
199 aa
AA seq
DB search
MFYKIVLQRTVNVKPADLCNTLNRSLLTFLREAVEGKPLPSPDSIASIALDYVTASKSSA
VVIAVLDILNAETLQGKVLDDGSVSFRLTYEAMVLKLHRGEVLDLLVSDVDETGFWASVY
GVNKLFVNRNQMGEDMKTGKSEWSFEAETAAWVSNDDRRSIKKDTMVRLRVIAETPQSER
GMAVGTIGAPFLGPRVGSY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgttctacaagatcgtccttcagcgaacggtaaatgtaaagccggcggacctgtgcaac
acgctgaatcgcagtcttctgaccttcctgcgagaggcggtcgagggaaagccgctgccg
tcgccagacagcatcgctagtatcgcactcgactacgtcacggcaagcaagtcgtcggcg
gtggtaattgccgtgctagatatcctgaatgcggagacgctgcaaggcaaggtgctcgat
gacggaagtgtgtcattccggctcacctatgaggcgatggtgctgaagctgcaccgaggt
gaggtgctggacctgctggtcagcgatgtggacgagacaggcttctgggcgagcgtctat
ggcgtcaataagctctttgtgaaccgcaaccaaatgggcgaggacatgaagacgggaaag
tcggagtggtcttttgaagcggagacagccgcgtgggtcagcaacgacgatcgccgctcc
atcaagaaggatacgatggtgcgcctgcgcgtcatcgcggaaaccccgcaatctgaacgt
ggcatggcggtcggcaccatcggtgccccgtttctgggtccacgcgtcggcagctattag
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