Leishmania major: LMJF_33_0410
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Entry
LMJF_33_0410 CDS
T01014
Name
(RefSeq) putative DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
lma
Leishmania major
Pathway
lma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LMJF_33_0410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lma03400
]
LMJF_33_0410
DNA repair and recombination proteins [BR:
lma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LMJF_33_0410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
MutS_II
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
5654430
NCBI-ProteinID:
XP_001685780
UniProt:
Q4Q4J6
LinkDB
All DBs
Position
33:complement(187128..189947)
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AA seq
939 aa
AA seq
DB search
MADERDGGVVQAFLALGADSSQCFRMFSRGSNSGCYVLGWWATFVANEYIKSTAVLKKWS
SASSSSATVDVVVVNDALCKEIIRDCLLRRGVSVEYFERETAGGSYVCRQRGSPGNITDF
EASLFEFEEAEIQLLASGSLVFGAKQATGTTIGFAALNNTLRQLSFAEYTDTPQFTSLDA
LVAQTNLKELLLCVMTPAASAGAEATFSDDDRITAVRRICERCGVQLSVRTLREVQQLQK
VEATAKGLEALAEILRVPEERLSLELCPIARQAVENILGRIDVMDPSNQRAFYLRRTVPS
TYVKLDSAAIEALNLVSKKPEPRGTLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCADDI
NQRLTMVELFVENPILRDMFTAQVLKRCSDMDRLNRKLQRRSLALKDTQAFLEFVNVVPA
ALQVLGTYTGPQSKLLKDEYIAPMEDINDHMANLKTLIEATVDFGDRNAVRMNATFDDEL
QDLHEQLTSTQRQIDKEYSRVLSKYGWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKEL
ITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELI
ATLDVYVAWALVVKDCPRPMVRPVVREAPGTVTLVKQEGTSARGADAAPLLSFKGLRHPL
VELRQPGYKANPLHLTTHTNGLLITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQ
VRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIVDELGRGTSTYDGFGLA
WAIAQDVAVRVRATLLFSTHFHELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGP
CGRSYGLYVASLAHLPEPVIACAKVKVAEWETFEKEGAAKSSAGAALDEAVVRKVSAYAK
RIRELEQLGPGDDHDAAVQRLKLEIRQDADVRPYLCEAA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcgcgacggtggtgttgtgcaggcctttctggcccttggcgccgactcc
agccaatgctttcgcatgttctccagaggctccaactcgggatgctacgtgctgggctgg
tgggccaccttcgtcgcgaacgagtacatcaagtccaccgccgtgctgaagaagtggtcg
agcgccagctcctcctctgccacggtggacgttgtcgttgtaaatgacgcactctgcaag
gagatcatccgcgattgcctgctgcggcgcggggtgtcggtggagtacttcgagcgagag
acggccggcgggtcgtatgtgtgccgccagcgcggctcgccggggaacatcaccgacttt
gaggcgtcgctcttcgagtttgaggaggcggagattcaattgctggcgagcggctccctg
gtgttcggtgcaaagcaggccacggggacaacgatcggtttcgcggcgctgaataacacg
ctgcggcagttgagcttcgccgagtacacggacacgccgcagttcaccagtctggacgcg
cttgtcgcgcagaccaacttgaaggagcttttgttgtgtgtgatgacacccgccgcatcc
gctggcgccgaagctaccttcagcgacgatgaccgaatcaccgcggtgcgccgcatatgt
gagcggtgcggcgtgcagctgagcgtgcgcacgctgcgcgaggttcagcagctgcagaag
gtggaagccactgcgaaaggcctcgaggcactggcagagattctgcgagtgccagaggag
cgtctgtcgctagagctctgcccgatcgcgcggcaagccgtggagaacattctcggccgc
atcgatgtcatggacccatcgaatcagcgcgccttctacctgcgccgcaccgtgccgtcc
acgtacgtgaagctggacagtgcggcgatcgaggcgctgaacttggtgagcaagaagccg
gagccgcgcggcacccttccgacgtctgtgttctcgtggctgaaccgctgtcacactggc
atgggcgcgcgtgcgatgcggcagtggctgctgcagccgctccgctgcgccgacgacatc
aaccagcgcctcaccatggtggaactcttcgtggagaaccccattctgcgcgacatgttc
acggcccaggtgctgaagcggtgcagcgatatggatcgacttaaccgcaaactgcagcgt
cgcagccttgctctgaaggatacgcaggcgttcctggaatttgtgaatgtcgtccctgcc
gctctacaggttttgggcacctacacaggtccgcagtcgaagctcttgaaagacgagtac
attgccccgatggaggatatcaacgaccatatggcgaacctgaagacgctcatcgaggca
acagtggatttcggtgaccgcaacgcggtccgcatgaacgcgacgttcgacgacgagctt
caggacctgcatgagcagctcacgagcacgcagcggcagatcgacaaggaatacagccgc
gtcctgagcaagtacgggtggaatgagaagcagctcaagcacgagtaccacggcacgtat
ggctacgtcttccgcgtctctcgcaaggaggatcgccagctgcgcagcacaaaggagctt
attacagtaagcacgtccaaggacggcgtacgatttgtgtcagagaagatggcggccctc
agcgagcagtaccggcgcatcagcgacgactacgagacgcggcagatggacctcaagcgc
aagcttgtggacaccatcgcctcctacctgcctgtgctcgacgacgcgaaggagctgata
gcgaccctcgacgtctacgtggcctgggctctcgtggtgaaggattgcccgcgccccatg
gtgcggccagttgtacgcgaggcccctggcactgtgacgttggtgaagcaggaggggaca
agcgcacgcggcgcagacgcggcgccactcctctccttcaaggggcttcgtcatcctttg
gtagagctgcgccagccgggctacaaggccaaccctctccacctcaccacgcacacaaac
ggactgctcatcaccggacccaacatgggcggcaagtccacgtacatgcgcagcgtcggt
gtcgctgtggtgctggcgcaagcgggctgctttgtgccggctgatgcggcggaggttcag
gtgcgcgacgctgtcatgtgccgcgtcggcgcgaccgatcacctggcacaaggtgtctct
acgtttatggtggagatgctcgagtctgcgtcgattctcacaggcgcgacgcaggatacc
ctcgccatcgtcgacgagctcggtcgcggcacatccacgtacgatggcttcgggttggcg
tgggcgattgcccaagacgtggcagtgcgtgttcgcgcgaccctgttgttctccacccat
tttcacgagctgacgcagctaccgcagcagtgcagcgctctgcagaacatgcactttggc
gccgaggtcgacgagtcggccggaacgctgcgcttctcctacactctccagccaggcccg
tgcggacgcagttacggcctgtacgtcgcgtcgttggcgcacctgccagagcccgtgatt
gcgtgcgccaaggtgaaggtagcggagtgggagacgtttgaaaaagagggcgccgcgaag
agcagtgctggagcggcgctcgacgaggcggtggtgcggaaggtttcggcgtacgccaag
cgcatccgtgagctggagcagctgggaccgggcgacgatcacgacgcggcggtgcagcgg
ctaaagctagagattcggcaggacgcagatgtccgcccgtatctgtgcgaggcggcgtag
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