Leishmania major: LMJF_34_0360
Help
Entry
LMJF_34_0360 CDS
T01014
Name
(RefSeq) putative DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lma
Leishmania major
Pathway
lma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMJF_34_0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lma03021
]
LMJF_34_0360
Enzymes [BR:
lma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMJF_34_0360
Transcription machinery [BR:
lma03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LMJF_34_0360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
5654790
NCBI-ProteinID:
XP_001686126
UniProt:
Q4Q3H2
LinkDB
All DBs
Position
34:128634..133382
Genome browser
AA seq
1582 aa
AA seq
DB search
MSQTATTAAQFVQPLLDKPVEVTSIKYSLLSEDTIHRLSVLPCHRVIGTEKNFGVNDGRL
GPSDRLSVCNTCGQRSIECTGHAGHIDLEVPVFHLGYFSAVIRVCRTICKRCSNVLLTRE
EMEYYLHRLRSTTHEPQQRAAIIKGIQEDAYKTRVCLMCGGLNGTVRRVRPMRIVHEKYL
VDLRRGEQANEDPTAFFQEELRSAVMHNSEVGAHKEFVHEFLHPQRVKKLFEAIPQEQVP
LLGLQPGTSPCSLLISTLLVPPVCVRPRGMSTTSHIREDDLTTQYNEILICSDMMSDGTN
DAARSVETWELLQTRVARLLDAALPGFPSHLRTVECKSYAQRMKGKQGRFRGNLSGKRVD
FSGRSVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVY
LSKECSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVL
PFRTFRFNECCCAPYNADFDGDEMNIHVVQTEEARAEAKELMLTSHNIITAKNGEPIIAC
TQDFLTAAYLVTSRDALFDRASFTQMVSHWLGNETQYALPIPAILKPAELWTGKQLFELI
LRPTPETQLLLNLEAKARFYSGAGRHDDPAEGYVAFLDSVFLSGRLDKKLLGGGAKDGLF
ARLYALGGGEQTATCMSRIAQFTARYLQNYGFSLGLGDVSPTPSLNEKKAAVLAVSFDKC
DRLISLAKTGRLIPKPGMSVKQSLEAMLNAELSQVRDACGSAAVQALDAKSNAPLIMVNS
GSKGSALNTAQMMACVGQQTVSGKRIMNAFQDRALPHFPRFAEDPASRGFVASSFYSGLS
PTEFFFHGMAGREGIVDTAVKTAETGYIYRRLSKAMENLSVGYDASVRSVQGNIVQLRYG
EDGMDPWLMEGAHGTPLNLDQEWLSNRAAYARFRKHIDSVISEGWGSGGLAASADPLLQT
YRRLYDEWHAVSMLPGELDTFVHHLLHADEATLASCARLMEVEAAIRGATPSSAAASQQL
LQQLAQQHGSDRLRSDIQAFFRKKRDELVQLRQKLKLPLDAHAPAAASAKAVRGGEKRKP
GPHGDVPPSVTADASTSAAAVQAFAESLQAELLPLTKGMLLHFLEASARKVHRKLCEPGT
PCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEIINANKSIATPVITAPIVL
EDEFTSIDLASASRTQYQAARAVKGLMERVLLKEITREMVEVVTPRAYYIHIFLNMELIE
RLLLPIDAAVVCQRLYAAAARPMSPLRHLSEACADVVSRDSLVIKSYEKDPARVHFNVQH
LLTLLPDLVVGGVPGVNRVMIADRSEKLLAEGAELLSVMSLPYVDGVRTTCNHVAVIERA
LGIEAARETIVKEITSILQAYSLNIDIRHIYLLADVMTSRGVVLGITRYGIQKMNNNVLT
MASFERTTEHLYNAAMTEREDVNLSVSESIIIGKPIPLGTSSFNILLNKGSVAPPGSNTG
RMPSPQRSAHAAAAALKSSGKAAAVGKHSKKVEPTPKEVFLRSSFMAYAAAHGAATHRGL
RGCFSSRSLSAEGVFRLDLFAS
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacggccaccacggctgcgcagtttgtgcagccgctgcttgataagccggtg
gaggtgacctcgatcaagtacagtctcctctctgaagacacgatccaccgcctctcggtc
ctgccctgccaccgcgtgattgggaccgaaaagaacttcggcgtcaacgatggccgcctt
ggcccgagtgaccgcttgtcggtgtgcaacacctgtggtcagcgcagcatcgagtgcact
ggccacgccggccacatcgacctcgaggtgcccgtcttccacctcggctacttctctgca
gtcattcgagtgtgccgcacaatctgcaagcgctgctccaacgtactcctcacacgagag
gagatggagtactacctgcaccggttgaggtccacgacacatgagccgcagcagcgcgcc
gccatcatcaagggtatccaggaggacgcctacaagacgcgcgtgtgcctcatgtgcggt
gggctgaacggcacggtgcggcgggtgcggccaatgcgtatcgtccacgaaaagtacctc
gtcgatttgcgccgcggtgagcaggcgaacgaggacccgacggcgtttttccaggaggag
ctgcggtccgctgtgatgcacaactcggaggtgggcgcgcacaaggagttcgtacacgag
ttcctgcatccgcagcgtgtgaagaagcttttcgaagcgattccgcaggagcaggtgccg
ttgctaggcctgcaacctggcaccagtccatgcagcctcctcatcagcaccttgctcgtc
ccacccgtgtgcgtgcggccgcgcggcatgtcgacgacgagccacatccgcgaggatgac
ttgacgacgcagtacaacgagattcttatctgctctgacatgatgagcgacggcacaaac
gacgccgcgcgcagcgtagagacgtgggagctgctgcagacgcgtgtggcgcggctgctg
gatgcggcgctgccagggtttccttcgcacttgcgcaccgtcgagtgcaagtcctacgcg
cagcgcatgaaaggcaagcagggccgtttccggggcaacctcagcggcaaacgcgtcgac
ttctctggacggtctgtcatttcacccgacccaaaccttcgcatcgacgagctcgccgtg
ccgctgcgcgtcgcgcgtgtgctgacgtacccgcagcgcgtctttgctggcaacatccag
ctcatgcgtcgactcgtgcgtaacggcccgcacgtgcacccgggcgccctcaccgtttac
ctttcgaaggagtgctcgcgcaagtcgctgcgcaacgcccgcgaccgtgaggccatcgcg
gcgcgcctcagcataggcgacgtcgtggagcggcacgtgatgaacggtgactacatcctc
ttcaaccgccagccgtcgctccaccgcatatcgctcatggcgcaccgcgcacgcgtgctg
cccttccgtacatttcggttcaatgagtgctgctgcgcaccgtacaacgccgacttcgac
ggagacgagatgaacatccacgttgtgcagacggaggaagcccgcgcagaggcgaaggag
ctgatgctgacgtcgcacaacatcatcactgccaagaacggtgagcccatcatcgcatgc
acgcaggactttctgaccgccgcctacctggtgacctcccgcgacgcccttttcgaccgt
gcctccttcacgcagatggtgtcccactggcttggcaacgagacacagtacgcgctacca
attccagccatcctgaagccagcggagctgtggaccggcaagcagctcttcgagctcatc
cttcggccaacaccagagacgcagctgctgctcaacttggaggcgaaggctcgcttctac
tctggtgctggccggcacgacgacccggcggaagggtatgtggcgttcctcgactccgtc
tttctctccggccgcctcgacaagaagctgctgggtggcggcgccaaggacggactcttt
gcccgcctctacgccctgggcggaggggagcagacggcgacgtgcatgtcgcgcatcgcg
cagttcaccgcccgctaccttcagaactatggcttctcccttggtctcggtgatgtgtcg
ccaacgccgtcgctcaacgagaagaaggcggccgtgctggccgtgtccttcgataagtgc
gatcgtctcatctctctcgccaagacgggccggctcatccccaagcctgggatgagcgtg
aagcagagcctggaggcgatgctgaacgcggagctgtcgcaggtgcgtgacgcgtgtggt
tcggccgccgtgcaagcgttggatgccaagtcgaacgcaccccttatcatggtgaactcg
gggagcaaaggcagcgccctcaacactgcacagatgatggcgtgcgtggggcagcagacg
gtcagcggcaaacgcatcatgaacgccttccaggaccgcgccctgccgcacttcccgcgc
ttcgccgaagaccccgcgtcgcgcggcttcgtggccagctccttctactctggcctgtcg
ccgacggagttctttttccatggcatggccggccgcgagggtattgtcgatacagccgtc
aaaaccgcagagacgggctacatctaccgccgcctcagcaaggccatggagaacctgagc
gttggctacgacgcctcggtgcgtagcgtgcagggaaacattgtgcagctgcggtacggc
gaggatggcatggacccgtggctgatggagggggcgcacggcacgccacttaacctcgat
caggagtggctcagcaaccgtgccgcctacgcccgctttcgaaagcacatcgacagtgtc
atcagtgagggatggggcagtggtgggctggccgcatcagcggatccgctcctccaaacg
taccgcaggctctacgatgaatggcacgccgtgtccatgctccctggtgagctggacacc
ttcgtgcatcatctgctgcacgcggatgaggcgacgctcgcctcctgcgcacgcctgatg
gaagtggaggcggcgatacgcggtgcgacaccgtcgtctgcggccgccagtcagcagttg
ttacagcagctcgcgcagcagcacggcagcgaccgcctgcgcagcgacattcaggcgttc
ttccgcaagaagcgcgacgagctggtgcagctgcggcagaagctgaagctgcccttggac
gcccatgcgcctgcagcggcgagcgccaaggcagttcgcggcggagaaaaacggaagcca
ggtccacacggtgacgtgccgccatccgtcacagccgatgcgtcaaccagcgcagctgca
gtgcaggcgtttgcagagtcgctgcaggccgagctgctgccacttaccaaaggcatgctg
cttcacttcctcgaggcgtcagcgcgcaaggtgcaccgcaagctgtgcgagcccggcacg
ccgtgcggcgccatcgccgctcagtctgtgggcgagccgagcacacagatgacgctccgc
acgttccactttgcaggtgtggccagcatgagcattacgcagggtgtgccacgcctcgtg
gagatcatcaacgccaacaagagcatcgccactccggttatcacggctcccattgtgtta
gaggacgaattcacgtcgatagacctcgcgtcggcgagccgtacgcagtaccaagccgcg
cgcgcggtgaagggcctgatggaacgggtgctgctgaaggagatcacacgcgaaatggtg
gaggtcgtgacgccgcgggcgtattacattcacatcttcctcaacatggagctcatcgag
cgcctcctgctgccaatcgatgcggcggtggtgtgccagcgactctacgcggcggccgcg
cggcccatgtcgccgctgcgccatctctccgaggcgtgtgccgacgtggtgagccgtgac
tccctcgtcatcaagtcctacgagaaggacccggcgcgggtgcactttaacgttcagcac
ctgctcaccctcctgcccgatctcgtggtcggtggcgtcccaggcgtcaaccgagtcatg
attgccgaccgctcggagaagctgctggcggagggagcggagctgttgtcggtgatgtcg
ctgccgtacgttgatggtgtgcgtaccacgtgcaaccacgtcgccgtcatagagcgcgcg
ctcggcatcgaggccgcccgcgagaccatcgtgaaggaaattacaagcatcttgcaagcc
tattcgctcaacatcgacatccggcacatctacctcctggccgacgtgatgacgagtcgc
ggcgtggtccttggcatcactcgatacggcatccaaaagatgaacaacaacgtcctcacc
atggcgtccttcgagcgcaccacggagcacttgtacaatgcggcgatgacggagagggag
gacgtcaacctcagcgtctccgaaagcattatcattggcaagccgatccccctcggcacc
agcagcttcaacatcctgctcaacaagggcagcgttgcgccacccggctccaacacgggt
cgaatgccgtcgccccagcgcagcgcccacgcagcagccgcggccttgaagtcgtctggc
aaggctgcggcggtcggcaagcacagcaagaaggtggagccgacgccgaaggaggtgttc
ctgcgcagctctttcatggcatacgccgccgcgcacggggcggcgacgcatcgaggcctg
cgtggctgcttttcaagtcggtcgctctccgccgagggggtcttccggttggacctcttc
gcgtcgtga
DBGET
integrated database retrieval system
