KEGG   Leishmania major: LMJF_35_3880
Entry
LMJF_35_3880      CDS       T01014                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
lma  Leishmania major
Brite
KEGG Orthology (KO) [BR:lma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lma03009]
    LMJF_35_3880
   04121 Ubiquitin system [BR:lma04121]
    LMJF_35_3880
Ribosome biogenesis [BR:lma03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    LMJF_35_3880
Ubiquitin system [BR:lma04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     LMJF_35_3880
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Sof1 NBCH_WD40 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 eIF2A WDR54 KNTC1_N Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 12980543
NCBI-ProteinID: XP_003722782
UniProt: E9AFL2
LinkDB
Position
35:complement(1537328..1538662)
AA seq 444 aa
MVKIKTISRSELEWTKDRATEVPKVNRNYDPKFNPMAKQVEFTRAVVAAKMDRMFAKPFV
AALPGHQDTIQSIATDITSLSTVATGSVDGGLIVWDAMKRKQRAVINAHRHSVDGVAISP
DGVACFSASRDKTVKMWDLDFDPDEERIEPVAEFLGEFPFSSIDHHFHKSWFATSSDVVN
IWDVNRTQPLQRFSWGDDTVSSCRFNKIETNLVACCMADRGVFLYDVRSQSAHSKIVMEM
CSTSLSWNPMDPNVFVTGSDDRNCYLFDIRVPGRPRNVFQGHIRPVTCVDFSPTGTMFAA
GSQDASLRIWDLHQTSKSDSIEMFHTKRMAGVYAVKWSPDNSYIYSGSEDAVLRVWKSDA
SKPIRPLRGPEKHKFNYMRSLKNKYSNFVEVKRISNQRNAPKAILRTSRRIKKAEKREAV
KEMSRIHGDNVKPLAKRKTYGYVE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggtcaagatcaagactatcagccgctccgagttggagtggacaaaagatcgcgcgacg
gaggtgcccaaggtcaatcgaaattatgatccgaagtttaatccaatggcaaaacaggta
gagttcacacgtgcggtggttgctgccaaaatggatcgtatgtttgcaaagccttttgtg
gctgcgctcccgggccatcaggatacgattcagtcgatcgctactgatattacaagcctg
tccaccgtagccacgggctctgttgacggcgggctaatagtatgggatgcgatgaagcgg
aagcagcgtgcggtcatcaacgcacatcgacactctgtcgacggcgtggccatctcgcca
gatggggtcgcctgctttagcgcttcgcgtgacaaaacagtgaagatgtgggatttggac
ttcgaccctgatgaagagcgtattgagccggtggccgagtttctcggtgagtttcccttc
tcctccatcgatcaccatttccacaagtcgtggttcgccacgtcgtcggacgtggtgaac
atctgggatgtcaatcgcacgcagcctctccagcggttttcttggggggacgacacggtg
tcttcctgccggttcaacaagattgagaccaatttagtcgcatgctgcatggcagatcgc
ggtgtcttcctgtacgacgttcgcagtcagtccgcccacagcaagattgtgatggagatg
tgttcaacatcactgtcgtggaacccgatggacccgaacgtgttcgtgacgggaagcgac
gaccgcaactgctacttattcgacatacgcgtgcctggacgtccgcgcaatgtcttccag
ggtcacatccgtcctgtcacatgtgtcgactttagtccgactggcaccatgtttgccgcc
ggatcgcaagacgcctcgttgcgcatttgggacctgcaccagacatccaagtccgactcg
attgagatgttccacacgaagcggatggccggcgtgtacgcggtgaagtggtctcccgac
aacagctacatttacagcgggagcgaagatgcggtgctgcgtgtgtggaagtccgacgcc
agtaagcctattcgtccactacgcggcccagagaagcacaagttcaactatatgcgctct
ttgaagaataagtactctaacttcgtcgaggtgaagcgaattagcaaccagcgtaatgca
cccaaggcaattctgcgcacgtcacgccgtatcaagaaggccgagaagcgtgaggcagtg
aaagagatgtcgcgcattcacggcgacaacgtgaagccgctggcgaagcgcaagacttac
ggctatgtggagtag

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