Leishmania major: LMJF_36_1850
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Entry
LMJF_36_1850 CDS
T01014
Name
(RefSeq) putative DEAD box RNA helicase
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lma03009
]
LMJF_36_1850
03029 Mitochondrial biogenesis [BR:
lma03029
]
LMJF_36_1850
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMJF_36_1850
Ribosome biogenesis [BR:
lma03009
]
Eukaryotic type
90S particles
Helicases
LMJF_36_1850
Mitochondrial biogenesis [BR:
lma03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
LMJF_36_1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5655441
NCBI-ProteinID:
XP_001686759
UniProt:
Q4Q1N9
LinkDB
All DBs
Position
36:complement(734586..736169)
Genome browser
AA seq
527 aa
AA seq
DB search
MSSAPRKLTKAMREDDDGGNSGSRASMRAPSTSSVKHQSLGSELLDDEEFKAKTFQDLGL
CQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQRK
TPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELSKRPHVVVGT
PGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMNYEKEIDAILEQLPQNRRTMLFSATLS
TKIDRLQKASLRDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIF
CRSAALVHKITLTLRILGHRALPLMGRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDI
PHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEY
PSLPESEVQLVLQRVEDAEQEAIREIREDAEERSLEKESRQLTTARKGKRDRGDADMGYD
DAKHGTSDFATLRMRREHESIFEMTKKEQHKSLWAKRREAKRQAKSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcaccgcgcaagctcaccaaggctatgcgcgaggatgatgacgggggcaat
agtgggagcagagcctccatgcgagccccgagcacctccagtgtcaagcaccaaagcctc
ggctctgagcttttggatgacgaggagttcaaggcgaagacattccaggaccttggtctg
tgccaggagctttgtgcggcgtgcgccgatgctggctggcagcacccgactcgcattcag
gcctccactatcaccgtctttgccgagggccgcgacctcattggtgtggcgcagactggt
agcggcaaaaccggcgcctatgcgctgcccctggtgaactggctgctggcccaacgcaag
acgccgtacctctctgtcctcgtgatggtgcccacgcgcgagctggcgcagcaggtgacg
gcccagtttgtactgcttggccgcagcgtcggactgcgtgtggcgaccctggtgggtggc
gcggacatggtcgagcaggcctgtgagctgagcaagcggccgcatgtcgtcgtcggaacc
cctggccgtgtaaaagaccacctcagcaacacgaagggcttcaagctcgtcaagctgcac
gccttagtgctggatgaggcggacaagatgctcgatatgaactacgagaaagagatcgac
gccattctggagcagctgccgcagaaccgccgcaccatgctcttttctgctacgctgagc
accaagattgaccgtctccagaaggcatcgctgcgggacccggtgctgctgcaggtgcac
cgcaagaacaccaccgtggacacacttaagcagtactacatcttcgcgccgtttgcgcag
atgctctcctacctgcacctcttcctaacgaaggagacgggcaaccacatcctcattttt
tgtcgaagcgcggctttggtgcacaagatcacgctgacgctccgcatcttgggccaccgc
gcgttgcctctgatgggtcgcatggaccaaagcaaccgcaacatcgcgctcaccaagttc
aaagagggaaaggtgaggatgcttatttgcaccgatgtcgcgcagcgcggtttggacata
cctcacacggatgtcgtcgtgaacttctcgctgcctgaccatgtcgaggactatatccac
cgcgtgggtcgcacagctcgcgctggggccgaaggcaaggccgtgaatctcattagccag
tacgacattgtactgctgcaaaagatcgagcagcaaacaggcgtcaagtgcgtcgagtac
ccctccctcccggagagcgaggtgcagctggtcctccagcgtgttgaggatgcagagcag
gaggccatccgcgaaatccgcgaggatgccgaggagaggagcttggagaaggagtcgcgg
cagctgacgacggcgcggaaaggcaagcgagaccgcggcgacgccgacatgggctacgac
gatgccaaacacggtacgagcgacttcgcaacactgcgcatgcgccgcgaacacgagtcc
atcttcgagatgaccaaaaaggaacagcacaaatctctgtgggcgaagcggcgggaggca
aagcggcaagcgaaatcgcgatag
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