Leishmania major: LMJF_36_4900
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Entry
LMJF_36_4900 CDS
T01014
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lma
Leishmania major
Pathway
lma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LMJF_36_4900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lma04131
]
LMJF_36_4900
Membrane trafficking [BR:
lma04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LMJF_36_4900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
Clathrin
zf-C3HC4_2
zf-RING_Vps41
TPR_Vps41
zf-RING_2
zf-rbx1
SCAB-PH
VPS8_N
zf-RING_UBOX
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
5655792
NCBI-ProteinID:
XP_001687076
UniProt:
Q4Q0S2
LinkDB
All DBs
Position
36:complement(1889388..1895732)
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AA seq
2114 aa
AA seq
DB search
MNVSGDGGVYRGPRPRPGADSSSILATSSGALPKTQNHSQCSVGSAEACKEEERLIVEDA
LRRLPQLAAFPLLSMSPRASSHVNDALVENSSFDSRQGTSYHLAADEEALLLQELVNITA
GAAPFMSTAAQEEQATGGSEKRPDEAATLLGSRETGTQVPAATATANGDSTSSAPKVSAS
EPAATSPAALSVHASTHTGKGASSSKRRRAVAPPTSSKTAVLKEEQDILDAILAAVDGQQ
SSVSGDLLGETSAAAGAEAAATSADSDEEIDEVDLVLGQAKQLTSSTVLCETQRGEVVLH
VHEHMALRCKLADLRKAAGEPTCVAVAESFDISARAPTHASTASPAAHTPSWSLRCAMGT
SLGVVVLFDRRWTVLGICGTVEASVGNARGAVVSLSLCTPTAALGGADETCDGRTAATGH
ARGTFVLWSLHTFSPLRVVSDESRVPVLRVMHLHRDPTRILVLDSSGAARFFQFWKVMAK
YVLRATTVTSASAAAPISDIDTLPCPSSFYMANLETLKQHMPCSNGEESDGDVSAPWLCA
PPPLPPSAATAAGISRTAWPTIAGKHFVATVSHDAVLVYVVDTGLQGTVTGVARHSHPPS
SALSNELVRFVVMEVERSTPRLLLCVSWNTEVELLLMNLRVPEPSGSGKTAAAEPMMEGL
ERLTLLRLSAPLVQMVPLAGCSVLLCDQNNHAHLMDASVAAMVERHRFGSLEYVGFASRL
CGVKYHGTAASNRAAALLMGKEHAYGLSLRSWRERLSSLLARRKYTQALDLAKGFAEEVA
LSTVGFSSNAANCRRELHQFMERILIAYVESRLAVLPRTEATGKSSGGPPKQSAGNSDPV
CGTEFLLDVLQQIAFYCSAVDGLNLLYGPVALALQHQGLLSHLLYVLEQCMRHGIITYMP
ETLIERFIYLFLDDAELDAVEVALGVRPLAPRDGKEARGDVLDADSAVKISGRDRVELAL
MSLDSGAPSLLRLAQEHGLVRLTVTILSLRQQRYVDALAYALDEEQKADEGLHGSDRGPE
VCAPRVPKCPSLFDSPDAASVAVDFVECTLKGVSLLPGASLAIGEQRPAKKAILEYLLRP
ASNDGRNADSGAVGGGVHNLLRFLRRQPEHAMRVLLFALSDEGPCSPWGGADGLSRTQFV
SSVYFILTGGSRTRPRHAAESDLLSASGQRQGPLDLFRIDDELLNRLPALRTLRATELAQ
RPFPPYIAVHTFLAGAAIFNELLLSTDADELASDEPDRPPVRLDVWLDLVIQDVLFAFQS
AERVEERRELQEHLLRVLAPDLLPPYRVAVFQSDFTRLRMARCLAALLCREQRYAEAIAC
YTDPMQNCVDAQLQQDVFKMLRDEMQHLQDLRTQTMNRAQQESSRSQRRGGSALDSDRNA
ASLVGGSATSEVGRGFGDDVEQYFSEESSLIAPTVTATATAPIDAAIKSLQLAVMSQVEL
LVRIDATSLAQFVFDYLPSNQREVMKLLRGSSAAFMDYLDELVTQGDQAVANDMNLQNTY
IELLCEHAPRRVYSYLQEKGNRVTYDVQLALRAVRKHRIADAAVYLLEKAMMIEDAMTVM
LRAVRELLGALREEVVTRVTPAAEAATEAQGDQDRNGLAPLLTSTPGAEAGEAATQRGCR
RRSTRGKEAPPLTCELASLDSATELRRFVGIGEELCRKHQAERVAGVASTSDAATPLAVA
SSRTFSSARHGFPGSSPQHPEYWFRLLDVFMVPRRLLCEMMTQDDRLQALDTAPVPARPF
TSSDPTGMSNELDAAAHIAMASYAGAAAASLANPPSAAGLPQHLANLTTPLSREQRRCVE
ALVAVYTQYTSSILQSMMRTLDVAVVVSKVVQDHKNGTFCALKPVLLDMMDTLSFDLEVS
RLCKLATERDVMLRGRELYQMLNRSVVPQSDCCAFCHINLREPPLPQPAGDEVDAAATVG
LVPSAVSVYTCGHTFHTVCAAQAMGSRQGCGICMQSRCSSGKPGEYEVYGNTSGASAAQP
STSGGAAADRAGHEDHADPVTTVVMRAAERTIDVARMQRRVRQTKMKMDHPEDFYSVLQS
LLAWDTSASDSSLGKAGPGGTRDGSGNRVLAPSPSVPAVAGQAHGPVTGGVATMQDKVLD
TLTDAEILELFGGV
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcgggcgacggaggggtttaccgagggccgcgcccacgcccaggggcagac
tcttcctccatattggccacgtcgtctggtgcgctccccaaaactcaaaatcacagccag
tgctcggtgggaagcgcagaggcatgcaaggaggaggagaggctcattgtcgaggatgca
ctgcgccgattgcctcaactcgccgcgttcccgctactgtcgatgtctcctcgggcctcg
agccacgtaaatgatgcactggtcgaaaactcgtctttcgactcgcgtcaaggtacctcg
taccatctggcagcggacgaggaggcgctgctgctgcaggagctggtgaacatcaccgcc
ggcgccgcaccattcatgtccactgccgctcaggaggagcaggccaccggcggctccgaa
aaaaggcccgacgaggctgctactctgctgggtagcagggaaacaggcacacaggtacca
gcagcaacagccactgcaaatggtgattccacctccagcgcaccgaaagtgtcggcaagc
gaacccgccgccacttccccggctgctttgtctgttcatgcctcgactcacacgggcaaa
ggtgccagctcgtcaaagcgaaggcgcgccgtcgcgccacccacatcttccaagacggcg
gtgctgaaagaggagcaggacatcctcgatgccattctcgctgctgtggacggtcagcag
tccagcgtcagtggtgatctgctgggcgaaacgtcggcggcggcgggggctgaagcggcg
gcaacttccgctgacagcgatgaggagatagacgaggtggacctggtgctggggcaggcg
aaacagctgacctcatcgaccgtgctgtgcgaaactcagcgtggtgaggtggtactgcac
gttcacgagcacatggcgcttcgctgcaaactggcggacctgcgcaaagcggccggggaa
ccgacgtgtgtggctgtggcagagtccttcgatataagtgccagggcgccgacgcacgca
agcaccgcttcaccggcggctcacactccgtcgtggtcgctcagatgcgccatgggcaca
tcgctcggcgtcgttgtcctcttcgatcgccgatggacggtgcttggcatatgcggcacc
gtggaggcgagcgtcgggaatgcccgtggcgccgtcgtctccctgtcactctgcaccccc
accgctgctcttggtggagccgatgagacatgcgatgggcgaacggcggccaccggccac
gcaagaggcacgtttgttctctggtcgctgcacacgttctcccctctgcgagtcgtgtcc
gatgagagcagggtgccggtgctgcgtgtgatgcacctgcatcgggacccgacacgcatt
ctcgtcctggacagcagcggtgccgcgaggttttttcagttttggaaagtgatggcgaag
tacgtgttgcgcgccaccaccgtcacctccgcttcagcggccgcgccgatcagtgacatt
gatacgttgccgtgtcccagcagcttctacatggccaatctggaaacgctgaagcagcac
atgccgtgcagcaacggagaggaaagcgatggcgacgtcagcgcaccgtggctatgcgca
cccccaccgcttccaccgtcagcggccaccgcggcaggcatctcgcggacggcgtggccc
acgatcgctggcaaacactttgtcgccacggtgagtcatgacgcggtgctggtgtacgtt
gtcgacacaggattgcagggcaccgtcacaggcgtggcgcgccatagccacccaccctcg
tcggcgctcagtaacgagctcgttcggtttgtcgtgatggaggtagagaggtcgacgccg
cggctgctgctgtgcgtctcttggaacaccgaggtggagctgctgttgatgaatctgcgc
gtcccagagccgagcggcagcgggaagacggcagcggcagagccgatgatggaaggcctg
gagcggcttaccctgctccggttgtcggcaccgctggtgcagatggttccgctggcgggg
tgcagcgtgcttttgtgcgaccaaaacaaccacgctcatctcatggacgcatccgtggcg
gctatggtggagcggcaccgctttggctctctcgagtacgttggcttcgcaagccgtctg
tgtggcgtcaaataccacgggaccgccgcgtcgaaccgcgccgcggctttgctgatgggc
aaagagcacgcctacggcctctcgcttcgttcgtggagggagaggctgtcctcacttcta
gcgcgccgcaagtacacccaggcgctggacctcgcgaaagggtttgccgaggaagtggcg
ctctccacggtcggcttcagcagcaacgccgcgaactgccgccgcgaactgcatcagttc
atggagcgcatcctcatcgcatacgtggagagccgtctcgctgtgttgccgaggaccgaa
gcgacaggcaagagcagtggtggaccgccaaagcagtcagcaggaaacagtgaccctgtt
tgcgggaccgagttccttcttgacgtgctacagcagattgcattctactgcagcgccgtc
gacggattaaacttgctgtatggccccgtcgccctcgcacttcagcatcaggggctgctt
tcgcacctgctgtacgtactagagcagtgtatgcggcacggcatcatcacgtacatgccc
gagacgctgattgagcgtttcatttatctgttcctcgatgatgctgaactcgatgcggtg
gaggtggcgctgggagtgcggccgctagcaccacgcgatggaaaggaagcgcgaggcgac
gtactcgatgcggattcagccgtgaagataagcggtagggaccgtgtggagctcgccctc
atgtccctcgactcgggcgctcctagtttgctgcggcttgcgcaagagcacggtttggta
cgcctcactgtgaccatcttgtcactgcggcagcagcgctatgtcgacgcgctggcgtac
gcgttggacgaggagcagaaagcagacgagggccttcacgggagtgaccgtggcccagag
gtctgtgcgccacgggtaccgaagtgtccaagtctttttgactcacccgacgccgcctcg
gtggctgttgactttgtcgagtgcaccttgaagggtgtgagcctcctgccaggggcttct
cttgccatcggtgaacaacgtccggccaagaaggcgattctcgagtatcttctgcggccg
gcctccaacgacggcaggaacgccgacagtggtgccgttggtggtggggtgcacaacctg
ctccgtttcttgcgacggcagccggagcacgccatgcgtgtactcctgttcgccctctcc
gacgaaggtccgtgtagtccgtggggcggcgctgatggactctctcgcacccagtttgtg
tctagtgtatacttcatcttgactgggggctcacgcacgcggccgcgccacgcagcggag
agcgacttgctgtcggcgagcggccaacggcagggtccgctggaccttttccgcattgac
gatgaattgttgaaccgtctcccggccctgcggacgctgagggcaaccgagctggcacag
cgccccttcccgccgtacatcgctgtccacaccttcctcgctggggccgccatcttcaat
gagcttttgctctccacggacgccgacgagctcgccagcgacgaaccggaccggccgcct
gtgcgcctcgacgtgtggcttgacctggtcatccaagacgtgctctttgcgtttcagagc
gccgagagagtcgaggagcggcgagaattgcaggagcacctgctccgtgtcctcgccccc
gacctgcttccaccatatcgtgtcgctgtgtttcagtcagacttcacgcggcttcgcatg
gcgcgctgcctggccgccctcctttgcagggagcagcggtatgcagaggcaattgcgtgc
tacacggaccctatgcagaactgtgtggatgcgcagctacagcaagacgtgttcaagatg
ctccgtgacgagatgcagcacttgcaagacctaaggacgcaaacaatgaaccgcgcccag
caagagtcgagtcggagccaacgccgtggaggcagcgcgcttgacagcgatcgcaatgcc
gcgtcgcttgtgggcggatcggccacgtctgaggtgggccgaggctttggcgacgacgtc
gagcaatacttcagtgaggaatcctcgttgatcgcgcccaccgttacggccaccgccaca
gctcctatcgacgctgccatcaagtccctccagctagcggtgatgagccaggtggagttg
ctcgtccgcatcgacgcgacttcgctcgcgcagttcgtcttcgactacttgccgtcgaac
caacgcgaggtgatgaagctacttcgcgggtctagcgccgccttcatggactacctcgat
gagctggtgacccaaggcgaccaggccgtagcaaacgacatgaacttgcagaatacgtac
attgagctcctctgcgaacatgctccgcggcgcgtgtacagctatctacaggaaaagggc
aatcgagtcacctacgatgtgcagctggcgctgcgtgccgtgcgcaaacaccgcatcgcc
gacgccgccgtatacttgctggaaaaggcgatgatgatcgaagatgcgatgacggtgatg
ctgcgggccgtgcgcgagctgctcggtgctcttcgcgaagaggttgtgacccgcgtgact
ccagctgcggaagcagcgactgaggcgcagggcgaccaagaccgtaacggacttgccccg
ctgctcacaagcacacccggtgctgaagcaggtgaagcggcgacgcagcgcggatgcagg
aggcgctcgactcgcggaaaggaggccccgccgctgacgtgcgagctcgccagtttggat
tcggcgactgagctgcggcgctttgtcggcatcggggaggagctgtgccgtaagcatcaa
gccgagcgtgtcgctggtgtggcgtcgaccagtgacgccgccactcctcttgcagtcgca
tcttcgcgcaccttttcctccgcaaggcacgggtttcccggtagctctccgcagcaccct
gagtactggtttcgactgcttgatgtcttcatggtgccgcgccggctcttgtgcgagatg
atgacgcaggatgatcggctgcaagctctcgacacagccccggtgccagctcggccattc
acaagcagcgaccccacaggtatgagcaacgagctagatgccgccgctcacatcgccatg
gcgtcctatgctggtgcggcagccgcgtcgctggcaaacccgccctctgctgcggggcta
ccgcagcacttggcgaacttgaccacacccctcagcagagagcagagacggtgcgtcgaa
gcgcttgtcgcggtctacacccagtacacctcgagcattctgcaatcgatgatgcggacc
ctcgacgtcgccgtcgtcgtgagcaaggtggtgcaagaccacaagaacgggacattttgc
gccctcaagcccgttcttttggatatgatggacaccctcagcttcgacctggaggtaagc
cgtctgtgcaagcttgcgacagagcgtgacgtgatgctgcgggggcgcgagctctatcag
atgctaaacaggagcgttgtgccacagtcggactgctgtgccttttgccacattaacctc
cgtgagccgcctctgccgcagccagcgggagacgaggtggacgctgctgccactgtcggt
cttgtaccttcggcagtttctgtgtacacgtgtgggcacacctttcacacggtctgcgct
gcgcaggcgatggggtcgcgccaggggtgcgggatttgcatgcagagcaggtgttcttct
ggcaagcccggagaatacgaggtttatggcaacaccagtggtgcatcagccgcgcagcct
tccacaagcggcggcgcagctgccgaccgcgcagggcacgaggaccatgccgaccctgtg
accaccgtggtcatgcgggcagcggaaaggaccatcgacgtggctcgcatgcagcgccgc
gtgcgccagacgaaaatgaagatggaccaccccgaagacttctactctgtgctgcagtcg
ctgctggcatgggacacctcggcgtccgactcttctctcggcaaagcgggacctggtggg
acgagagacgggtcaggcaaccgggtacttgcgccgtctccatcagttcctgccgtggct
ggccaggcgcacgggcccgtgacaggcggggtggcaaccatgcaggacaaggtcctcgac
accctcactgatgcggagatcctggagctgtttggcggggtctga
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