Lysinibacillus macroides: I6G82_11280
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Entry
I6G82_11280 CDS
T08056
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmac
Lysinibacillus macroides
Pathway
lmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G82_11280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmac03019
]
I6G82_11280
03400 DNA repair and recombination proteins [BR:
lmac03400
]
I6G82_11280
Enzymes [BR:
lmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G82_11280
Messenger RNA biogenesis [BR:
lmac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G82_11280
DNA repair and recombination proteins [BR:
lmac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G82_11280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
SNF2-rel_dom
DUF5637
PAC_bac
Motif
Other DBs
NCBI-ProteinID:
QPR70104
LinkDB
All DBs
Position
complement(2226531..2227973)
Genome browser
AA seq
480 aa
AA seq
DB search
MELDQLLHKHFGYTTFRPGQKEVIEAILQRNDVIALLPTGMGKSLCYQLPAYALQKSVLI
VSPLLSLMQDQVEELKRFGEKRVVALNSFLAPTEKRYVLHFLEQYRFIFTSPEMLLQQQV
QERLTQMELGLIVVDEAHCISQWGFDFRPDYLRIGEWFAKDNRPPILALSATATSKVVQD
IRETLSLQTPFEFMYNVDRPNIHLGRVLLENRAEKANWLMQHMKATAGPGILYVSSRKRA
QQYCDAFLQMGIRTAAYHAGYGAEDRQFIQQQFIDDELEWIVATNAFGMGINKPNIRQVI
HETMPANIANYMQEIGRAGRDGQSALAILLYCEGDEELAKFVVTGDLPTAGHVDRYQELL
AQQGQPVSMLKNGELSETAFRVLDYWVQRESTEQVKARFNHLALEKYRAVDDMHKLIQTK
DCIREQLVEYFGQKLQKRPENCCENCGIHYDKIKKVRLQEEKKSEMASWERRLQQLLIGM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaccaactattgcacaagcattttggctatacaacctttcgtccaggacaa
aaagaagtgattgaggccattctacaaagaaatgatgtgattgctttactgccaacagga
atgggcaagtcattgtgctatcagcttccagcctatgccctacaaaagtccgtcttaatc
gtatcgccattgctgtctctgatgcaggaccaggtagaggagctaaagcgttttggggaa
aagagagtggtcgctttaaattcatttttagcaccaacagaaaagcgttatgttctccat
tttttagaacagtaccgttttatttttacatcgcctgagatgttgctacaacagcaggta
caagagcggctaacacagatggagctagggttaattgtcgtagatgaggcacattgtatc
tcgcaatggggctttgattttcgccctgattatttgcgaatcggtgaatggtttgcaaag
gacaatcgtccaccaattttagccttatcggcaactgctacgagtaaggtagtgcaagat
attcgtgaaacattatcattacagacaccgtttgaatttatgtataatgtagaccgcccc
aatattcatctgggccgagtgctgttagagaatagggctgagaaagcaaactggcttatg
cagcatatgaaagcgacagcaggaccgggtattttatatgtatcttctcgtaagcgtgca
cagcagtattgtgatgcctttttacaaatgggcattcgtacagcagcatatcatgcaggg
tatggagcggaggatcgccagtttattcagcagcaatttatagatgatgagctagagtgg
attgtggcaacaaatgcctttggaatgggaattaataaacctaatatacgtcaggtgatt
catgaaacaatgccagctaatatcgcaaattatatgcaggagattgggcgtgctggccgt
gatggtcagtctgcgcttgctattttattgtactgtgagggggatgaggagctagcaaag
tttgtggtaacaggggatttaccaacagcgggtcatgttgatcgttatcaggagctgctg
gcccagcaaggacagccagtttctatgttaaaaaacggtgaattaagtgaaacagccttt
cgtgtattggactattgggttcaacgggagtctacagagcaggtaaaggctcgattcaat
catttagccctagaaaaatatcgtgcagtagatgatatgcacaagcttattcagacaaaa
gactgtattcgtgaacaacttgtcgagtattttgggcaaaaattgcagaaaagaccagaa
aactgttgtgaaaattgtggcatccattatgataaaatcaagaaagtacgattacaggaa
gaaaagaaaagcgaaatggcttcttgggaaaggcggctacagcagcttttaataggtatg
tag
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